Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0794
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 168 1e-40
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 158 1e-37
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 143 3e-33
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 105 1e-21
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 102 1e-20
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 98 2e-19
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 94 3e-18
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 94 3e-18
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 88 2e-16
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 84 3e-15
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 83 8e-15
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 81 2e-14
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 80 4e-14
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 71 4e-11
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 49 1e-04
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 49 1e-04
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 49 1e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.019
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.025
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 41 0.033
UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila melanogaster|... 38 0.31
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 37 0.41
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.41
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3.8
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 33 8.8
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 168 bits (409), Expect = 1e-40
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = +3
Query: 255 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 434
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPGY AE+K
Sbjct: 129 EFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETK 188
Query: 435 KFNAEVHRAHIFGLHVAEYMRSLEQ 509
FNA+VHRAHIFG HVA+YMRSLE+
Sbjct: 189 SFNADVHRAHIFGQHVADYMRSLEE 213
Score = 107 bits (258), Expect = 2e-22
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
PKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 47 PKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTG 102
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIR 613
+DE+SFKRQFS+YIKLG+ AD +E IYKKAH+AIR
Sbjct: 214 EDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIR 248
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 158 bits (383), Expect = 1e-37
Identities = 71/84 (84%), Positives = 75/84 (89%)
Frame = +3
Query: 255 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 434
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 435 KFNAEVHRAHIFGLHVAEYMRSLE 506
FNAE HRAHIFG HVA+YM +LE
Sbjct: 158 TFNAEAHRAHIFGQHVADYMHALE 181
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 138
PKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 47 PKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAG-SIPQEER 640
+D ++FKRQFS+YIKLG+ AD IE IYKKAH+AIRA SI + E+
Sbjct: 183 EDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIRADPSIKKVEK 227
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 143 bits (347), Expect = 3e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +3
Query: 255 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 434
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 435 KFNAEVHRAHIFGLHVAEYMRSL 503
+FNAEVHR HI G +VA+YMR L
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYL 211
Score = 105 bits (252), Expect = 1e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
PKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 47 PKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAGSIPQEE 637
+DED++K+QFS+YIK VT D +E +YKKAH AIR + +++
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 105 bits (251), Expect = 1e-21
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 EYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES 431
+YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF G+D ES
Sbjct: 129 DYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQES 186
Query: 432 KKFNAEVHRAHIFGLHVAEYMRSLEQ 509
K++NAE HR I G HVA+YM L++
Sbjct: 187 KEYNAEAHRDRILGKHVADYMTYLKE 212
Score = 100 bits (240), Expect = 3e-20
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
PKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 47 PKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATG 102
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAGSIPQEER 640
+DED +KRQFSK++ G+ AD + A Y+K H AIRA + P ++
Sbjct: 213 EDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAKK 256
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 102 bits (244), Expect = 1e-20
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +3
Query: 294 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 473
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Query: 474 LHVAEYMRSLEQ 509
HVA+Y++ +++
Sbjct: 231 KHVADYLKQVKE 242
Score = 84.6 bits (200), Expect = 2e-15
Identities = 34/56 (60%), Positives = 47/56 (83%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 70 PKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATG 125
Score = 37.9 bits (84), Expect = 0.24
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 533 QFSKYIKLGVTADAIEAIYKKAHEAIRA 616
QFSKY+ V ++IE +YKKAH AIRA
Sbjct: 254 QFSKYMAAKVLPESIEGMYKKAHAAIRA 281
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 437
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY + +
Sbjct: 79 YHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDEEN 138
Query: 438 ---FNAEVHRAHIFGLHVAEYMRSLEQ 509
++A+ HR IFG HVA YM L++
Sbjct: 139 NGTYDAQAHRDRIFGAHVASYMEYLKE 165
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +1
Query: 34 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTG 51
Score = 41.1 bits (92), Expect = 0.025
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAGSI 625
+D + +++QFS Y+K G+ + A+E +Y KAHE IR +
Sbjct: 166 EDPERYRKQFSAYLKHGLESSALEDMYLKAHENIRKNPV 204
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 434
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GYD + K
Sbjct: 138 DYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDK 197
Query: 435 KFNAEVHRAHIFGLHVAEYMRSLEQ 509
+ + +I G VAEY +++
Sbjct: 198 SHDPDTLERYIKGGVVAEYAEEMQE 222
Score = 93.5 bits (222), Expect = 4e-18
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +1
Query: 4 HEPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
+ PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 54 NSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATG 111
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY-----D 422
+NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY +
Sbjct: 419 FNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDE 478
Query: 423 AESKKFNAEVHRAHIFGLHVAEYMRSLE 506
ES K+ E H+A IFG H+ YM+ L+
Sbjct: 479 GESSKYKPEDHKARIFGKHIDAYMKHLK 506
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
PKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAAAY+TG
Sbjct: 336 PKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATG 391
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +3
Query: 297 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 476
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E R +I G+
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGI 202
Query: 477 HVAEYMRSLEQ 509
HVAEYM S+++
Sbjct: 203 HVAEYMASMKE 213
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
K R IVR +N + CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 48 KLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATG 102
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIR 613
+D D +K F+ Y+K + + IE +Y AHE IR
Sbjct: 214 EDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKIR 248
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
Frame = +3
Query: 294 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAH 464
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDR 196
Query: 465 IFGLHVAEYMRSLEQ 509
IFG+HV +YM L++
Sbjct: 197 IFGVHVDKYMALLQK 211
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +1
Query: 4 HEPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
+ PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 45 NSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 82.6 bits (195), Expect = 8e-15
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3
Query: 315 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 494
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 22 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 434
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+ +
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGHKPDG- 180
Query: 435 KFNAEVHRAHIFGLHVAEYMRSL 503
F+A+ IFG +++EYM+ L
Sbjct: 181 SFDAKELHDRIFGYNISEYMKQL 203
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 42 KHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAAYATG 96
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 512 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAI 610
D + +K QFS YIK G+ + I IYK A + I
Sbjct: 207 DPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKI 239
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/93 (39%), Positives = 62/93 (66%)
Frame = +3
Query: 237 NRCHR*EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 416
+R + +Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G
Sbjct: 37 SRLSKSDYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVG 95
Query: 417 YDAESKKFNAEVHRAHIFGLHVAEYMRSLEQMM 515
++K+ +A+VHR I+G +V+ Y+ +L+ +
Sbjct: 96 SSKDNKQLDAKVHRKSIYGGYVSAYIETLKTFL 128
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 47 KYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG 101
Score = 68.9 bits (161), Expect = 1e-10
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 18/149 (12%)
Frame = +3
Query: 294 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR----FPGYDAESKKFNAEV--- 452
F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R F D ++ K +V
Sbjct: 136 FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAE 195
Query: 453 -----HRAHIFGLHVAEYMRSL-----EQMMRILSRDNSAST*N*ESLQMLLKPSTRKPM 602
++ +I G VA+YMR L E+ + SR A +SL+ + K +
Sbjct: 196 KIVKGNQYYILGGAVADYMRKLKKESEEKYNKQFSRYVKAGI-TADSLEKIYKDAHAAIR 254
Query: 603 K-PSVRVPSHKKKEFKKDSVKQKRLEQTP 686
K P+ V + KKK + +KQK + P
Sbjct: 255 KNPAATVIADKKKH--AEEMKQKHAPKKP 281
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 306 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHV 482
+D+GL R T G + F +MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHI 189
Query: 483 AEYMRSLE 506
+Y+ L+
Sbjct: 190 IKYIDLLK 197
Score = 37.5 bits (83), Expect = 0.31
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +Y G
Sbjct: 48 KKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 306 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 413
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 19 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 288 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 416
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 177
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 288 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 413
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 288 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 398
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect = 0.077
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 13 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 306 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 413
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 19 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 509 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAGSIPQEER 640
D+ + ++ FS YIK + D IE +YKK H AIR P++ +
Sbjct: 32 DEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQ 75
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 426 ESKKFNAEVHRAHIFGLHVAEYMRSL 503
+SK+ +AEVHR +I+G HVA YM L
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNIL 29
>UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila
melanogaster|Rep: IP11866p - Drosophila melanogaster
(Fruit fly)
Length = 540
Score = 37.5 bits (83), Expect = 0.31
Identities = 32/110 (29%), Positives = 46/110 (41%)
Frame = -3
Query: 388 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSHL*HLLCQCIRCQVQ 209
T RPP +AP P TR P R KP++K P+ST S LL + +
Sbjct: 262 TPRPPPSAPSRPPTTRKPSAQRIKPSNK------CPISTKSQKLGGAKVLLEIILATKQH 315
Query: 208 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 59
+ L +L +L H+ D S ++V +T + E RPP
Sbjct: 316 ALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPTTKTSERIEKPEPRPP 365
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 37.1 bits (82), Expect = 0.41
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 10 PKYRLIVRLSNKDVTCQVAYSRIEGD 87
PKYR +VR +NKD+T Q+ + I GD
Sbjct: 58 PKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.41
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 306 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 413
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 19 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 177
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 288 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 413
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 367 APFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGS 266
AP AP T AP AKP+S LN PG +TGS
Sbjct: 646 APAPAPSTAAPATTSAKPSS---LNIPGVSTTGS 676
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,806,689
Number of Sequences: 1657284
Number of extensions: 13988057
Number of successful extensions: 38823
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 37002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38780
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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