Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0794
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           27   0.19 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.34 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.6  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
 Frame = +3

Query: 285 PGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF--PGYDAESKKFNAEVHR 458
           PG       V +AR    AR    +K   +G  N+   I  F    +++ S+  N ++ +
Sbjct: 43  PGGKTAPQPVAVARRN--ARERNRVKQVNNGFANLRQHIPNFIAAAFESNSRGGNKKLSK 100

Query: 459 AHIFGLHVAEYMRSLEQMMRILSRDNSAST*N*ESLQMLLKPSTRKPMKPSVRVPSH 629
                + V EY+RSLE ++ +     S+ST        +  PST   +  +   P H
Sbjct: 101 VETLRMAV-EYIRSLEDLLALDESTVSSST------SSIPSPSTTDDLSTNPTPPPH 150


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +2

Query: 509 DDEDSFKR---QFSKYIKLGVTADA 574
           +D+D +K+   QFSK IKLG+  D+
Sbjct: 418 EDKDGYKKFYEQFSKNIKLGIHEDS 442


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 311 CRLSTHHYWCSCLWSYEG 364
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = +3

Query: 579  KPST---RKPMKPSVRVPS 626
            KPST   +KP KPS R PS
Sbjct: 1160 KPSTSSWQKPTKPSYRPPS 1178


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 551 KLGVTADAIEAIYKKAHEAIRAGSIPQEERV*ERLCQTEALGTNASL 691
           KLG  A  +E  Y K        S+ Q+E+   RL   EA  + ASL
Sbjct: 190 KLGELAQVVELEYLKTDLIPMFLSLTQDEQDSVRLLAVEACVSFASL 236


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 238  LCQCIRCQVQVF---EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 95
            L +C+ C  Q     +A  + IAD L ML   L       + + H++++R+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 238  LCQCIRCQVQVF---EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 95
            L +C+ C  Q     +A  + IAD L ML   L       + + H++++R+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 238  LCQCIRCQVQVF---EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 95
            L +C+ C  Q     +A  + IAD L ML   L       + + H++++R+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 238  LCQCIRCQVQVF---EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 95
            L +C+ C  Q     +A  + IAD L ML   L       + + H++++R+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 74  GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 199
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 202 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 104
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 385 LRPPSTAPFIAPKT 344
           L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 350 WSYEGCC*RWPQCSSFHQKIPWL*CRIQ 433
           WS       W  CSSF Q+     C I+
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHCYCPIK 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,186
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)