Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0789
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    25   2.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.8  
AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    24   4.8  
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    24   4.8  

>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 335 LLSTILSRVVVCCILAEDK 391
           + ST+L  +V CC +AE K
Sbjct: 3   VFSTVLLAIVACCAVAEAK 21


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 178 LTIRSSKESVSQEICNLLADQF 243
           +T + +  + + E+CNL AD+F
Sbjct: 487 ITYKGATSANTNEMCNLFADRF 508


>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 604 LF*RLKN*TCRIMEMDFRPQGIYI*FKKETIMIININLS*FLSMNQTQTI 455
           L+   K+  CR +++  R  GI +  K+ T++  +  +  FL +N  QTI
Sbjct: 8   LYTNRKSPPCRAVKLTARALGIELVEKEMTLLRGDKLMEEFLKVNPQQTI 57


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 604 LF*RLKN*TCRIMEMDFRPQGIYI*FKKETIMIININLS*FLSMNQTQTI 455
           L+   K+  CR +++  R  GI +  K+ T++  +  +  FL +N  QTI
Sbjct: 8   LYTNRKSPPCRAVKLTARALGIELVEKEMTLLRGDKLMEEFLKVNPQQTI 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,018
Number of Sequences: 2352
Number of extensions: 12653
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)