Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0789
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK094317-1|BAC04329.1| 482|Homo sapiens protein ( Homo sapiens ... 114 3e-25
AF289221-2|AAL11040.1| 955|Homo sapiens alpha-adaptin A related... 114 3e-25
AF289221-1|AAL11039.1| 977|Homo sapiens alpha-adaptin A related... 114 3e-25
AC006942-1|AAD15564.1| 819|Homo sapiens Human alpha-adaptin A h... 114 3e-25
BC006155-1|AAH06155.1| 939|Homo sapiens adaptor-related protein... 112 9e-25
AK223558-1|BAD97278.1| 940|Homo sapiens adaptor-related protein... 112 9e-25
AB020706-1|BAA74922.2| 939|Homo sapiens KIAA0899 protein protein. 112 9e-25
BC014214-1|AAH14214.1| 982|Homo sapiens AP2A1 protein protein. 34 0.38
BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein. 33 1.2
AY494000-1|AAR98754.1| 333|Homo sapiens G protein-coupled recep... 31 3.5
AL161622-2|CAI20456.1| 510|Homo sapiens protein ( vel protein s... 30 6.2
>AK094317-1|BAC04329.1| 482|Homo sapiens protein ( Homo sapiens
cDNA FLJ36998 fis, clone BRACE2007295, highly similar to
ALPHA-ADAPTIN A. ).
Length = 482
Score = 114 bits (274), Expect = 3e-25
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ KL GFG LLD +DPNP+NFV AGI+ TK QVGCL+RLEPN QAQMYRLT+R
Sbjct: 405 DAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLR 464
Query: 190 SSKESVSQEICNLLADQF 243
+SKE VS+ +C LLA QF
Sbjct: 465 TSKEPVSRHLCELLAQQF 482
>AF289221-2|AAL11040.1| 955|Homo sapiens alpha-adaptin A related
protein protein.
Length = 955
Score = 114 bits (274), Expect = 3e-25
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ KL GFG LLD +DPNP+NFV AGI+ TK QVGCL+RLEPN QAQMYRLT+R
Sbjct: 878 DAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLR 937
Query: 190 SSKESVSQEICNLLADQF 243
+SKE VS+ +C LLA QF
Sbjct: 938 TSKEPVSRHLCELLAQQF 955
>AF289221-1|AAL11039.1| 977|Homo sapiens alpha-adaptin A related
protein protein.
Length = 977
Score = 114 bits (274), Expect = 3e-25
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ KL GFG LLD +DPNP+NFV AGI+ TK QVGCL+RLEPN QAQMYRLT+R
Sbjct: 900 DAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLR 959
Query: 190 SSKESVSQEICNLLADQF 243
+SKE VS+ +C LLA QF
Sbjct: 960 TSKEPVSRHLCELLAQQF 977
>AC006942-1|AAD15564.1| 819|Homo sapiens Human alpha-adaptin A
homolog [AA 159-977] protein.
Length = 819
Score = 114 bits (274), Expect = 3e-25
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ KL GFG LLD +DPNP+NFV AGI+ TK QVGCL+RLEPN QAQMYRLT+R
Sbjct: 742 DAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLR 801
Query: 190 SSKESVSQEICNLLADQF 243
+SKE VS+ +C LLA QF
Sbjct: 802 TSKEPVSRHLCELLAQQF 819
>BC006155-1|AAH06155.1| 939|Homo sapiens adaptor-related protein
complex 2, alpha 2 subunit protein.
Length = 939
Score = 112 bits (270), Expect = 9e-25
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ K+ GFG LL+ +DPNP NFV AGI+HTK Q+GCL+RLEPN QAQMYRLT+R
Sbjct: 862 DTEVTKAKIIGFGSALLEEVDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLR 921
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+VSQ +C LL+ QF
Sbjct: 922 TSKEAVSQRLCELLSAQF 939
>AK223558-1|BAD97278.1| 940|Homo sapiens adaptor-related protein
complex 2, alpha 2 subunit variant protein.
Length = 940
Score = 112 bits (270), Expect = 9e-25
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ K+ GFG LL+ +DPNP NFV AGI+HTK Q+GCL+RLEPN QAQMYRLT+R
Sbjct: 863 DTEVTKAKIIGFGSALLEEVDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLR 922
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+VSQ +C LL+ QF
Sbjct: 923 TSKEAVSQRLCELLSAQF 940
>AB020706-1|BAA74922.2| 939|Homo sapiens KIAA0899 protein protein.
Length = 939
Score = 112 bits (270), Expect = 9e-25
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
D T+ K+ GFG LL+ +DPNP NFV AGI+HTK Q+GCL+RLEPN QAQMYRLT+R
Sbjct: 862 DTEVTKAKIIGFGSALLEEVDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLR 921
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+VSQ +C LL+ QF
Sbjct: 922 TSKEAVSQRLCELLSAQF 939
>BC014214-1|AAH14214.1| 982|Homo sapiens AP2A1 protein protein.
Length = 982
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNP 81
D T+ KL GFG LLD +DPNP
Sbjct: 878 DAEVTKAKLLGFGSALLDNVDPNP 901
>BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein.
Length = 156
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -1
Query: 121 ASLYGQCRHIQSYLD*DRYHLIIACQIQPILFLCQSNPRA 2
A+++ Q R +Q+ + + H +I C +PI+F C S PR+
Sbjct: 36 AAIFDQFRGVQNIVVGEGTHFLIPCVQKPIIFDCCSQPRS 75
>AY494000-1|AAR98754.1| 333|Homo sapiens G protein-coupled receptor
33 protein.
Length = 333
Score = 31.1 bits (67), Expect = 3.5
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -3
Query: 536 YII*KRNHYDNKHKPVLISQYESNTNYSELEKYYNKTKINSLLYLGDFIC-LLLKCNILQ 360
Y+I + H+D K K + Y +TN+ E ++ I+ ++ F+ LL I+
Sbjct: 163 YLIFRETHHDRKGKVTCQNNYAVSTNWESKEMQASRQWIHVACFISRFLLGFLLPFFIII 222
Query: 359 LCSKXXXXXXXXXXXNC*ASITPFKCLSTILCVILSYFQNW 237
C + S PFK + T I+S+F W
Sbjct: 223 FCYERVASKVKERSLF--KSSKPFKVMMT---AIISFFVCW 258
>AL161622-2|CAI20456.1| 510|Homo sapiens protein ( vel protein
similar to seven ).).
Length = 510
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 151 VPVSLNIQLVASLYGQCRHIQSYLD*DRYHLIIACQIQPILFL 23
V + LN + S +G C L+ +RYH I C+I +L
Sbjct: 37 VSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYL 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,694,759
Number of Sequences: 237096
Number of extensions: 1787168
Number of successful extensions: 2951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2951
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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