Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0789
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11104-1|CAA71991.1| 940|Drosophila melanogaster alpha-adaptin ... 137 1e-32
BT003458-1|AAO39461.1| 799|Drosophila melanogaster RH30202p pro... 137 1e-32
AE014134-99|AAS64634.1| 952|Drosophila melanogaster CG4260-PB, ... 137 1e-32
AE014134-98|AAF56103.2| 940|Drosophila melanogaster CG4260-PA, ... 137 1e-32
Y13092-1|CAA73533.1| 939|Drosophila melanogaster alpha-adaptin ... 135 6e-32
BT022716-1|AAY55132.1| 536|Drosophila melanogaster RE69201p pro... 30 3.1
AE014134-951|AAF52276.2| 606|Drosophila melanogaster CG31646-PA... 30 3.1
BT012314-1|AAS77439.1| 298|Drosophila melanogaster LP16520p pro... 29 4.1
AE014298-1790|AAF48183.1| 298|Drosophila melanogaster CG15728-P... 29 4.1
AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p pro... 29 5.4
AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA... 29 5.4
>Y11104-1|CAA71991.1| 940|Drosophila melanogaster alpha-adaptin
protein.
Length = 940
Score = 137 bits (332), Expect = 1e-32
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
DL G R KL GFGMQLLD +DPNPDN VCAGI+HT+ QQVGCLMRLEPNKQAQM+RLT+R
Sbjct: 863 DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVR 922
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+V++EIC+LL DQF
Sbjct: 923 ASKETVTREICDLLTDQF 940
>BT003458-1|AAO39461.1| 799|Drosophila melanogaster RH30202p
protein.
Length = 799
Score = 137 bits (332), Expect = 1e-32
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
DL G R KL GFGMQLLD +DPNPDN VCAGI+HT+ QQVGCLMRLEPNKQAQM+RLT+R
Sbjct: 722 DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVR 781
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+V++EIC+LL DQF
Sbjct: 782 ASKETVTREICDLLTDQF 799
>AE014134-99|AAS64634.1| 952|Drosophila melanogaster CG4260-PB,
isoform B protein.
Length = 952
Score = 137 bits (332), Expect = 1e-32
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
DL G R KL GFGMQLLD +DPNPDN VCAGI+HT+ QQVGCLMRLEPNKQAQM+RLT+R
Sbjct: 875 DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVR 934
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+V++EIC+LL DQF
Sbjct: 935 ASKETVTREICDLLTDQF 952
>AE014134-98|AAF56103.2| 940|Drosophila melanogaster CG4260-PA,
isoform A protein.
Length = 940
Score = 137 bits (332), Expect = 1e-32
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
DL G R KL GFGMQLLD +DPNPDN VCAGI+HT+ QQVGCLMRLEPNKQAQM+RLT+R
Sbjct: 863 DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVR 922
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+V++EIC+LL DQF
Sbjct: 923 ASKETVTREICDLLTDQF 940
>Y13092-1|CAA73533.1| 939|Drosophila melanogaster alpha-adaptin
protein.
Length = 939
Score = 135 bits (326), Expect = 6e-32
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +1
Query: 10 DLTGTRTKLAGFGMQLLDGIDPNPDNFVCAGIVHTKMQQVGCLMRLEPNKQAQMYRLTIR 189
DL G R KL GFGM LLD +DPNPDN VCAGI+HT+ QQVGCLMRLEPNKQAQM+RLT+R
Sbjct: 862 DLPGARNKLMGFGMPLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVR 921
Query: 190 SSKESVSQEICNLLADQF 243
+SKE+V++EIC+LL DQF
Sbjct: 922 ASKETVTREICDLLTDQF 939
>BT022716-1|AAY55132.1| 536|Drosophila melanogaster RE69201p
protein.
Length = 536
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 126 LLHLCMDNAGTYKVIWIRIDT 64
+L +DN TYK+ W+R+DT
Sbjct: 69 VLQCVVDNLQTYKIAWLRVDT 89
>AE014134-951|AAF52276.2| 606|Drosophila melanogaster CG31646-PA
protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 126 LLHLCMDNAGTYKVIWIRIDT 64
+L +DN TYK+ W+R+DT
Sbjct: 148 VLQCVVDNLQTYKIAWLRVDT 168
>BT012314-1|AAS77439.1| 298|Drosophila melanogaster LP16520p
protein.
Length = 298
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 197 RSQFLKKSATYLLTSFENMIES---HIKLLINT*MV*LMLSS-LGCRVAILLSTILSRVV 364
R+ FL+K Y+ S E+ I H+ L++ ML+ LGCRVA L T+ S V
Sbjct: 90 RTLFLQKCFNYMACSEESHIHQVCVHVLGLLDIQSSSTMLNLILGCRVASPLCTMASVVA 149
Query: 365 VCCILA 382
C + A
Sbjct: 150 NCLLWA 155
>AE014298-1790|AAF48183.1| 298|Drosophila melanogaster CG15728-PA
protein.
Length = 298
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 197 RSQFLKKSATYLLTSFENMIES---HIKLLINT*MV*LMLSS-LGCRVAILLSTILSRVV 364
R+ FL+K Y+ S E+ I H+ L++ ML+ LGCRVA L T+ S V
Sbjct: 90 RTLFLQKCFNYMACSEESHIHQVCVHVLGLLDIQSSSTMLNLILGCRVASPLCTMASVVA 149
Query: 365 VCCILA 382
C + A
Sbjct: 150 NCLLWA 155
>AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p
protein.
Length = 625
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 196 KESVSQEICNLLADQF*KYDRITHKIVD-KHLNGVID--A*QFRL*SSYTTKYNFEQSCS 366
KE E+C L D++ K +I+H ++ + + ++ A ++ + T Y F ++CS
Sbjct: 244 KEKSVLELCEHLLDRY-KNLKISHNVLSYRPMAKIVARLAKKYGFDDAVTPNYKFTKTCS 302
Query: 367 MLHFSRRQMKSPK 405
LH+ R+ + +
Sbjct: 303 YLHYLYREYEKTR 315
>AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA
protein.
Length = 625
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 196 KESVSQEICNLLADQF*KYDRITHKIVD-KHLNGVID--A*QFRL*SSYTTKYNFEQSCS 366
KE E+C L D++ K +I+H ++ + + ++ A ++ + T Y F ++CS
Sbjct: 244 KEKSVLELCEHLLDRY-KNLKISHNVLSYRPMAKIVARLAKKYGFDDAVTPNYKFTKTCS 302
Query: 367 MLHFSRRQMKSPK 405
LH+ R+ + +
Sbjct: 303 YLHYLYREYEKTR 315
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,456,344
Number of Sequences: 53049
Number of extensions: 549693
Number of successful extensions: 1094
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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