Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0787
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 158 1e-37
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 146 3e-34
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 128 9e-29
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 120 2e-26
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 120 4e-26
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 3e-23
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 91 3e-17
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 86 8e-16
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 7e-14
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 79 7e-14
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 75 2e-12
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 73 8e-12
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 70 4e-11
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 70 4e-11
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 70 6e-11
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 67 3e-10
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 67 4e-10
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 66 6e-10
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 66 6e-10
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 64 4e-09
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 63 5e-09
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 61 3e-08
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 60 5e-08
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 60 5e-08
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 58 3e-07
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 56 6e-07
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 56 8e-07
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 54 2e-06
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 54 3e-06
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 54 4e-06
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 53 7e-06
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 52 1e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 3e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 3e-05
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 50 7e-05
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 49 9e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 49 1e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 49 1e-04
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 47 4e-04
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 8e-04
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.008
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 41 0.024
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 41 0.031
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 39 0.096
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 38 0.17
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 38 0.29
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 38 0.29
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 37 0.51
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 36 0.67
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 36 0.67
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 36 0.67
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 36 0.89
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 35 1.6
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 34 2.7
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 34 2.7
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 3.6
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 3.6
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 34 3.6
UniRef50_Q00Y01 Cluster: Mitochondrial phosphate carrier protein... 33 4.8
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 33 6.3
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 6.3
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 33 8.3
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 158 bits (383), Expect = 1e-37
Identities = 79/143 (55%), Positives = 99/143 (69%), Gaps = 4/143 (2%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+APEG +TGQFVYCG+ ATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+AT
Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGIS--PVQRQT- 604
I HN D K+TRVKLPSGAKKV+PS+ A ++ ID+ + + V+R +
Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSW 196
Query: 605 -LLLGICTWVLP*NPVAHPHGGG 670
+ G+ NPV HPHGGG
Sbjct: 197 PKVRGVAM-----NPVEHPHGGG 214
Score = 147 bits (357), Expect = 2e-34
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 207 VHFRDPYKFKTRKELFLLPK 266
VHFRDPY++K RKELF+ P+
Sbjct: 61 VHFRDPYRYKIRKELFIAPE 80
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 146 bits (355), Expect = 3e-34
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 4e-30
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 128 bits (310), Expect = 9e-29
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPYK+K R E F+
Sbjct: 61 VTFRDPYKYKMRTETFI 77
Score = 91.1 bits (216), Expect = 2e-17
Identities = 56/139 (40%), Positives = 74/139 (53%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG YTGQF+YCGK A L++ RG+LARASGN+AT
Sbjct: 77 IATEGMYTGQFIYCGKKANLQI------------------------RGKLARASGNYATV 112
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNPD K++RVKLPSG+KKV+PS+ A ++ ID+ + + + +
Sbjct: 113 ISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCW 172
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HPHGGG
Sbjct: 173 PKVRGVAM-NPVEHPHGGG 190
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 120 bits (290), Expect = 2e-26
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 207 VHFRDPYKFKTRKELFLLPKATT 275
V FR P++FK +KELF+ + T
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCT 83
Score = 39.9 bits (89), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 287 VYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDR 394
+YCGK ATL VGNV+P+ ++PEG + G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 120 bits (288), Expect = 4e-26
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +2
Query: 236 DKEGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARAS 415
DKE + EG Y+GQ++YCG A+L +GNV+P+G PEGT+VCN+E K GDRG +ARAS
Sbjct: 63 DKE-LFICAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARAS 121
Query: 416 GNFATXIGHNPDAKRTRVKLPSGAK 490
GN+AT I HN D + TR++LPSGAK
Sbjct: 122 GNYATVISHNADNETTRIRLPSGAK 146
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3
Query: 150 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFL 257
+G+VK I HDPGRGAPLA V FR+P ++ KELF+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFI 68
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 3e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +3
Query: 39 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 218
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 219 DPYKFKTRK 245
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 90.6 bits (215), Expect = 3e-17
Identities = 48/138 (34%), Positives = 74/138 (53%)
Frame = +2
Query: 257 APEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXI 436
A EG Y GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A I
Sbjct: 70 AAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVI 129
Query: 437 GHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLLG 616
G P+ +T ++LPSG + S A ++ I++ + + K + +
Sbjct: 130 GQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYP 189
Query: 617 ICTWVLP*NPVAHPHGGG 670
+P AHPHGGG
Sbjct: 190 TVRGKAM-SPYAHPHGGG 206
Score = 38.7 bits (86), Expect = 0.13
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 27 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 203
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 204 VV 209
+
Sbjct: 57 KI 58
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 85.8 bits (203), Expect = 8e-16
Identities = 48/140 (34%), Positives = 73/140 (52%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
LLA EG G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +AT
Sbjct: 69 LLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYAT 128
Query: 431 XIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLL 610
+ H +A RT V +PSG K L A ++ +D+ + + K ++ +
Sbjct: 129 VVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAK 186
Query: 611 LGICTWVLP*NPVAHPHGGG 670
+ V NP HP GGG
Sbjct: 187 YPRVSAVAM-NPRDHPFGGG 205
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 164
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/102 (39%), Positives = 61/102 (59%)
Frame = +2
Query: 212 LPRSIQVQDKEGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGD 391
L R ++ E + A EG Y GQ + G A E GN++P+G +PEGT V N+E + GD
Sbjct: 55 LARVVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGD 114
Query: 392 RGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEA 517
G+LAR +G++A +G +T ++LPSG K +P+ + A
Sbjct: 115 GGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPNDSRA 154
Score = 35.9 bits (79), Expect = 0.89
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 27 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 203
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 204 VVHFRDPYKF 233
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +2
Query: 239 KEGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
+E +L PEG G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G
Sbjct: 68 EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPG 127
Query: 419 NFATXIGHNPDAKRTRVKLPSG 484
+AT I H D RT V+LPSG
Sbjct: 128 CYATIIAH--DVGRTYVQLPSG 147
Score = 49.6 bits (113), Expect = 7e-05
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 27 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 203
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 204 VVHFRDPYKFKTRKELFLLPKAT 272
V F D + L L+P+ T
Sbjct: 61 RVRFED-----GEERLILVPEGT 78
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A E Y + + CG A GNV+P+ +P G VCN+EEK GD G+LAR++G F
Sbjct: 103 IAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGV 162
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEA 517
+ H+ T++KLPS K+L S A
Sbjct: 163 LSHSKYNNVTKLKLPSKKIKILSSFCRA 190
Score = 39.9 bits (89), Expect = 0.055
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 207 VHFRDPYKFKTRKELFL 257
+ F FK EL++
Sbjct: 87 IKFNVTKYFKNYYELYI 103
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 70.1 bits (164), Expect = 4e-11
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Frame = +2
Query: 257 APEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXI 436
A EG YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A +
Sbjct: 74 AAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILV 133
Query: 437 GHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET----WKGISPVQRQT 604
G + ++ ++LPSG K + + A + ++ + +K + ++
Sbjct: 134 GKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWP 191
Query: 605 LLLGICTWVLP*NPVAHPHGGG 670
++ G+ N V HPHGGG
Sbjct: 192 VVRGVAM-----NAVNHPHGGG 208
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/149 (26%), Positives = 70/149 (46%)
Frame = +2
Query: 224 IQVQDKEGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRL 403
I ++ + + A EG YTGQ + G A +++GN+ + +PEG V ++E GD G
Sbjct: 53 ISFKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTF 112
Query: 404 ARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGI 583
A +G+++ + H + T +K+PSG K + S ++ + D+ +
Sbjct: 113 AMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAH 172
Query: 584 SPVQRQTLLLGICTWVLP*NPVAHPHGGG 670
+ + + V NPV H HGGG
Sbjct: 173 YKAKARGHVFPRVRGVAM-NPVEHIHGGG 200
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 69.7 bits (163), Expect = 6e-11
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Frame = +2
Query: 263 EGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGH 442
+G GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + +G
Sbjct: 71 QGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGK 130
Query: 443 NPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET----WKGISPVQRQTLL 610
D + VKL S + S+ A ++ V ++ + WK ++ +
Sbjct: 131 TGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHV 188
Query: 611 LGICTWVLP*NPVAHPHGGG 670
G+ N V+HPHGGG
Sbjct: 189 RGVAM-----NAVSHPHGGG 203
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 203
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 204 VVHFRDPYKF 233
++ D KF
Sbjct: 56 LIKLDDGTKF 65
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 67.3 bits (157), Expect = 3e-10
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+L +G G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G
Sbjct: 105 ILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQ 164
Query: 431 XIGHNPDAKRTRVKLPSG-AKKVLPSS-TEAWSVLLLEVDVID--QXYFETWKGISPVQR 598
+G + D K ++L SG +KVL V E ++++ + W+GI P R
Sbjct: 165 ILGKDDDGKYVTLRLTSGEVRKVLADCYATIGEVGNEEYNLVNWGKAGRNRWRGIRPTVR 224
Query: 599 QTLLLGICTWVLP*NPVAHPHGGG 670
+++ NP HPHGGG
Sbjct: 225 GSVM----------NPNDHPHGGG 238
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 66.9 bits (156), Expect = 4e-10
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+L P G G + G +++GN +P+ MP GT + N+E G G+LARA+G A
Sbjct: 102 ILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAK 161
Query: 431 XIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDV----IDQXYFETWKGISPVQR 598
I + K +KLPSG +++ + A + V V + + + W G PV R
Sbjct: 162 LIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVR 219
Query: 599 QTLLLGICTWVLP*NPVAHPHGGG 670
++ NPV HPHGGG
Sbjct: 220 GVVM----------NPVDHPHGGG 233
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 66.5 bits (155), Expect = 6e-10
Identities = 37/92 (40%), Positives = 51/92 (55%)
Frame = +2
Query: 242 EGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGN 421
+ L AP G G VY GK A +G++ P+ +PEGT + LE GD G+L RASG+
Sbjct: 66 QSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGD 125
Query: 422 FATXIGHNPDAKRTRVKLPSGAKKVLPSSTEA 517
FA + D + V+LPSG K L ++ A
Sbjct: 126 FALLVQKLGD--KVIVQLPSGQFKTLSANARA 155
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 66.5 bits (155), Expect = 6e-10
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+LAP+G G V G A ++VGN +P+ +P GT++ N+E K G G+LAR++G A
Sbjct: 104 ILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQ 163
Query: 431 XIGHNPDAKRTRVKLPSGAKK--VLPSSTEAWSVLLLEVDVIDQXYF--ETWKGISPVQR 598
+G + K V+L SG + +L S +V + ++I+ W+G P R
Sbjct: 164 LLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTVGNEQHELINSGKAGRTRWQGKRPTVR 221
Query: 599 QTLLLGICTWVLP*NPVAHPHGGG 670
+++ NP HPHGGG
Sbjct: 222 GSVM----------NPNDHPHGGG 235
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 63.7 bits (148), Expect = 4e-09
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A G Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA
Sbjct: 65 IAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALV 124
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGI----SPVQRQ 601
+ H R +KLPSG+ + A ++ +ID + + S +R
Sbjct: 125 VSH---GSRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRP 181
Query: 602 TLLLGICTWVLP*NPVAHPHGGG 670
+ G+ N V HPHGGG
Sbjct: 182 YTVRGVAM-----NAVNHPHGGG 199
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 200
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 63.3 bits (147), Expect = 5e-09
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = +2
Query: 224 IQVQDKEGA-LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGR 400
I+ D E A +LAP+ G V G ++ GN MP+ +MP GTI+ N+E G G+
Sbjct: 94 IRYTDGELAYILAPQRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQ 153
Query: 401 LARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVD---VID-QXYFE 568
+AR++G +A +G D ++L SG ++++ + A + D + D +
Sbjct: 154 IARSAGTYAQLVGR--DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRS 211
Query: 569 TWKGISPVQRQTLLLGICTWVLP*NPVAHPHGGG 670
W+G P R + NPV HPHGGG
Sbjct: 212 VWRGKRPHVRGVAM----------NPVDHPHGGG 235
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Frame = +2
Query: 266 GYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHN 445
G G+ + G + +E GNV+ + +P+GTIVCN+E+ GD G + +++G AT H
Sbjct: 75 GAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHG 134
Query: 446 PDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET---WKGI-SPVQRQTLLL 613
+ VKLPSG L A L ++ + W+ + ++ ++
Sbjct: 135 DEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVR 192
Query: 614 GICTWVLP*NPVAHPHGGG 670
G+ HPHGGG
Sbjct: 193 GVAQ-----AAYVHPHGGG 206
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 200
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 201 AVVHFRD 221
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 60.1 bits (139), Expect = 5e-08
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Frame = +2
Query: 248 ALLAPEG-YYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNF 424
A L P G Y + + Y VGN +P+ +P GT V N+E G +L RA+G F
Sbjct: 335 AWLHPRGDYASSENKYILDSYYQMVGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTF 394
Query: 425 ATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET----WKGISPV 592
A I + + V+LPSG K++ S A ++ ++ + + + W G P+
Sbjct: 395 AQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPI 454
Query: 593 QRQTLLLGICTWVLP*NPVAHPHGGG 670
R + NPV HPHGGG
Sbjct: 455 VRGVAM----------NPVDHPHGGG 470
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 60.1 bits (139), Expect = 5e-08
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 311 LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAK 490
++ GN MP+ +PEGTIV N+E G G++ARA+G +A +G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 491 KVLPSSTEA--WSVLLLEVDVI--DQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHP 658
+++ A V L E +++ + W G P R T + NPV HP
Sbjct: 209 RMIHERCMATVGRVGLAEHELVKLGKAGRARWLGWRPHTRGTAM----------NPVDHP 258
Query: 659 HGGG 670
HGGG
Sbjct: 259 HGGG 262
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 57.6 bits (133), Expect = 3e-07
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+LA G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A
Sbjct: 198 ILASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQ 257
Query: 431 XI-GHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET----WKGISPVQ 595
I HN K ++LPSG K P A ++ ++ + + W G P
Sbjct: 258 LIKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDLKKAGASRWLGRRPTV 314
Query: 596 RQTLLLGICTWVLP*NPVAHPHGGG 670
R + NP+ HPHGGG
Sbjct: 315 RGVAM----------NPIDHPHGGG 329
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 56.4 bits (130), Expect = 6e-07
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
++AP G G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G
Sbjct: 110 IVAPAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQ 169
Query: 431 XIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVID--QXYFETWKGISPVQRQT 604
+ + R++ K + V E +++ + W+G+ P R
Sbjct: 170 LVAKEGEYATLRMRSGEMRKVLADCKATIGEVSNNEHNLVSLGKAGASRWRGVRPTVRGV 229
Query: 605 LLLGICTWVLP*NPVAHPHGGG 670
+ NPV HPHGGG
Sbjct: 230 AM----------NPVDHPHGGG 241
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 56.0 bits (129), Expect = 8e-07
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +2
Query: 317 VGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKV 496
VGN + + +P GT V N+E G +L RA+G FA I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 497 LPSSTEAWSVLLLEVD----VIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPHG 664
+ S A ++ + +D+ W G P+ R + NPV HPHG
Sbjct: 381 IDSRCRATVGIVSNLHHGKRKLDKAGQSRWLGRRPIVRGVAM----------NPVDHPHG 430
Query: 665 GG 670
GG
Sbjct: 431 GG 432
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Frame = +2
Query: 266 GYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHN 445
G G + G + + GNV+ V +P+GT VCN+E+ GD G + +++G AT H
Sbjct: 74 GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHG 133
Query: 446 PDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFET---WKGI-SPVQRQTLLL 613
+KLPSG L A L V ++ + W+ S ++ ++
Sbjct: 134 EGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVR 191
Query: 614 GICTWVLP*NPVAHPHGGG 670
G+ HPHGGG
Sbjct: 192 GVAQ-----AAYVHPHGGG 205
Score = 35.9 bits (79), Expect = 0.89
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 203
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 204 VVHFRD 221
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 54.0 bits (124), Expect = 3e-06
Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = +2
Query: 242 EGALLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGN 421
+G + PEG G + G A VGN P MP GT++ +E G G+ ARA+G
Sbjct: 101 KGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGA 160
Query: 422 FATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVD----VIDQXYFETWKGISP 589
A + + +R LP G + +P + A VD + + W G P
Sbjct: 161 PAKPVAKEGQSATSR--LPPGEVRSIPQNRPAVVGQAGNVDSKNRASGKAGSKRWPGSRP 218
Query: 590 VQRQTLLLGICTWVLP*NPVAHPHGGG 670
R ++ NPV HPHGGG
Sbjct: 219 RVRGVVM----------NPVDHPHGGG 235
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 53.6 bits (123), Expect = 4e-06
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 314 EVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKK 493
+VGN +P+ GT V N+E + G G++ RA+G +A + P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 494 VLPSSTEAWSVLLLE----VDVIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPH 661
+ S A ++ + + W G PV R + NPV HPH
Sbjct: 353 AVDSRCHATIGIVSNPSHGTRKLRKAGHSRWLGRRPVVRGVAM----------NPVDHPH 402
Query: 662 GGG 670
GGG
Sbjct: 403 GGG 405
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+LAP G G + G + ++VGN +P+ +P T + N+E G G+L R++G+ AT
Sbjct: 130 VLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAAT 189
Query: 431 XIGHNPDAKRTRVKLPSGAKKVL 499
+ D V+LPSG ++++
Sbjct: 190 LVKKADDGGYCVVRLPSGEQRLV 212
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 52.0 bits (119), Expect = 1e-05
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXAT-LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFA 427
+++P+G G + + ++ G MP+ +PEGT V N+E G++AR++G++A
Sbjct: 109 IISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYA 168
Query: 428 TXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVD----VIDQXYFETWKGISPVQ 595
+G + K ++L SG + A ++ +D VI + +GI P
Sbjct: 169 RILGQDETGKYVILQLLSGETRKFLKECRATVGVVSNLDHNLVVIGKAGRNRHRGIRPTV 228
Query: 596 RQTLLLGICTWVLP*NPVAHPHGGG 670
R + + NP HPHGGG
Sbjct: 229 RGSAM----------NPNDHPHGGG 243
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +2
Query: 311 LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAK 490
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA + +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 491 KVLPSSTEA 517
+ + + A
Sbjct: 272 RYVHMNCHA 280
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.8 bits (116), Expect = 3e-05
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 314 EVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKK 493
+VGN +P+ + GT V ++E G +LARA+G +A I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 494 VLPSSTEAWSVLLLEVD----VIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPH 661
++ S A ++ + + + W G P+ R + NPV HPH
Sbjct: 417 LIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAM----------NPVDHPH 466
Query: 662 GGG 670
GGG
Sbjct: 467 GGG 469
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 49.6 bits (113), Expect = 7e-05
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 344 MPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWS 523
MP GT + N+E G G+LARA+G A I + K +KLPSG +++ + A
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 524 VLLLEVDV----IDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPHGGG 670
+ V V + + + W G PV R ++ NPV HPHGGG
Sbjct: 61 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVM----------NPVDHPHGGG 103
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 49.2 bits (112), Expect = 9e-05
Identities = 34/118 (28%), Positives = 57/118 (48%)
Frame = +2
Query: 317 VGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKV 496
+GN + + +P GT++ N+E G + RA+G FA I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 497 LPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPHGGG 670
+ S A ++ ++ + + F + R+ ++ G+ NPV HPHGGG
Sbjct: 180 INSQCRA-TIGIVSNENHGKRNFRKAGQSRWLGRRPVVRGVAM-----NPVDHPHGGG 231
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 48.8 bits (111), Expect = 1e-04
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +2
Query: 317 VGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKV 496
+G+ MP+G M GTI+ N+E G ++ RA+G A + P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 497 LPSSTEAWSVLLLEVDVIDQXYFET----WKGISPVQRQTLLLGICTWVLP*NPVAHPHG 664
+ + A + + ++ W GI P R + NP HPHG
Sbjct: 73 INAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAM----------NPCDHPHG 122
Query: 665 GG 670
GG
Sbjct: 123 GG 124
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 308 TLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGA 487
T + GN +P+ +P GTI+ N+ G+ R++G +A + P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 488 KKVLPSSTEAWSVLLLEVD----VIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAH 655
+ + A ++ +D + + W GI P R + N H
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAM----------NKCDH 343
Query: 656 PHGGG 670
PHGGG
Sbjct: 344 PHGGG 348
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVL 499
GN +P+ MP GT+V N+ + G G+L R++G FAT I ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 46.0 bits (104), Expect = 8e-04
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFAT 430
+LAPEG G ++ + L+ GN + +P G + ++E + RA+G++AT
Sbjct: 85 ILAPEGLLVGDCIFAKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYAT 144
Query: 431 XIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXY----FETWKGISPVQR 598
I + K +KL SG + + S+ A + I + + F KG PV R
Sbjct: 145 II--SKFEKIVILKLKSGELRRVHSNCMATIGSISNFQYIYRNFRKAGFYRLKGWLPVVR 202
Query: 599 QTLLLGICTWVLP*NPVAHPHGGG 670
+ NPV HPHGGG
Sbjct: 203 GVAM----------NPVDHPHGGG 216
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = -3
Query: 397 TSITXFLFKIAHNGTLRHSSNRHHIXNFKSCXLSTINKLACVVAFGSKKSSFLVL 233
T++T + +AHNGTL S R +I N + L+TI++L V A G + FL+L
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLML 61
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEG 355
++ E YTGQFV C K ATL V NV+P+ + PEG
Sbjct: 42 IVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRK 98
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAK 457
GN +P+ +P GT++ N+ + G G+L R++G +AT I D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 40.7 bits (91), Expect = 0.031
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Frame = +2
Query: 278 GQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARAS--GNFATXIGHNPD 451
G +Y G+ L++GN++P+ +P G+ + N+E + S F IG
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLIYIG---- 164
Query: 452 AKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISP-VQRQTLLLGICTW 628
K +KLPSG ++L + +L E+++I + G + + ++ + G+
Sbjct: 165 KKYVTIKLPSGEIRLLNKNV---FCILGELNIIPLFLKKNKAGFNRLLGKRPKVRGVAM- 220
Query: 629 VLP*NPVAHPHGGG 670
N HPHGGG
Sbjct: 221 ----NACDHPHGGG 230
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.1 bits (87), Expect = 0.096
Identities = 28/108 (25%), Positives = 50/108 (46%)
Frame = +2
Query: 344 MPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWS 523
+P GTI+ N+ + + +++GNFA I D + ++KLPSG K + T +
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG-KIIKHPITSLAT 193
Query: 524 VLLLEVDVIDQXYFETWKGISPVQRQTLLLGICTWVLP*NPVAHPHGG 667
+ + + + + R+ ++ G+ NPV HPHGG
Sbjct: 194 IGSISNEQLRNIVIGKAGRNRNLGRRPIVRGVAM-----NPVDHPHGG 236
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 38.3 bits (85), Expect = 0.17
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +2
Query: 308 TLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGA 487
+L GN + + GT++ +E G +R+SG+ + I D K +KLPSG
Sbjct: 98 SLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSRSSGSESEIIFK--DNKFGVIKLPSGI 155
Query: 488 KKVLPSSTEAWSVLLLEVDVIDQXYF---ETWKGISPVQRQTLLLGICTWVLP*NPVAHP 658
KK + + A + +V + Y W+GI P R + NPV HP
Sbjct: 156 KKKISLNCMATIGKICTFNVKKKLYKAGQNRWRGIRPTVRGVAM----------NPVDHP 205
Query: 659 HGGG 670
HGGG
Sbjct: 206 HGGG 209
Score = 36.3 bits (80), Expect = 0.67
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 54 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 230
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 397 TSITXFLFKIAHNGTLRHSSNRHHIXNFKSCXLSTINKLACVVAFGSKKSSFLVL 233
T +T + +AHNGTL S R +I N + L+ +++L V A + FL+L
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLML 73
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 37.5 bits (83), Expect = 0.29
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 311 LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAK 490
L+ GN +P+ +P G+I+ + R +L RA+G F +G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 491 KVL 499
+ +
Sbjct: 280 RYI 282
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 36.7 bits (81), Expect = 0.51
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 299 KXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLP 478
K L+VG + +PEG ++ N+E +L+RA+G ++ I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGT-SSLIIKQYNKKYSLVKLS 160
Query: 479 SGAKKVLPSSTEAW----SVLLLEVDVIDQXYFETWKGISPVQRQTLLLGICTWVLP*NP 646
S +++ + A S + ++ + KGI P+ R + NP
Sbjct: 161 SKECRLISNECYATIGTVSNIEKKIKKSKKASESRKKGIRPIVRGLAM----------NP 210
Query: 647 VAHPHGG 667
V HPHGG
Sbjct: 211 VDHPHGG 217
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 36.3 bits (80), Expect = 0.67
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 311 LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAK 490
L+ GN + + GT++ E +G +R++G+ + I N + +KL SG K
Sbjct: 99 LKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNFGI--IKLSSGIK 156
Query: 491 KVLPSSTEAWSVLLLEVDVIDQXYF---ETWKGISPVQRQTLLLGICTWVLP*NPVAHPH 661
K + + A + ++ + Y WKGI P R + NPV HPH
Sbjct: 157 KKISINCMATIGKICTFNLNKKLYKAGQNRWKGIRPTVRGVAM----------NPVDHPH 206
Query: 662 GGG 670
GGG
Sbjct: 207 GGG 209
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 36.3 bits (80), Expect = 0.67
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXI 436
G+ PVGA+P GT++ E K G R +G+ AT +
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 36.3 bits (80), Expect = 0.67
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPS 481
G+ P+GA+P GT + LE+ G + L A+G F T + D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 35.9 bits (79), Expect = 0.89
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 251 LLAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXG 388
+LAP G G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 171 VLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 299 KXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGH 442
+ TL+ GNV+P+ +P G V N+ R +L R++G F + H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVL 499
GN +P+ +P GT+V N+ + R++G +AT I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 34.3 bits (75), Expect = 2.7
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Frame = +2
Query: 239 KEGALLAPEGYYTGQFVYCGKXAT-LEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARAS 415
K ++AP G + + L+ G+ + + G+++ NL G G++ RA
Sbjct: 82 KNNYIIAPTKIKKGDIIRSNSTRSGLQNGHSKTLQNILTGSLIYNLSLSPGKDGKILRAP 141
Query: 416 GNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDV----IDQXYFETWKGI 583
G F + + R+K SG + T A + ++ D + + W G
Sbjct: 142 GAFGRILKRTKTLAKIRLK--SGQYRWFDIKTIATNGVVSNPDSRFTKLQKAGQSRWLGR 199
Query: 584 SPVQRQTLLLGICTWVLP*NPVAHPHGGG 670
P R + NP+ HPHGGG
Sbjct: 200 RPTVRGVAM----------NPIDHPHGGG 218
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEE-KXGDRGRLARASGNFATXIGHNPDAKRTRVKLP 478
GN P+G++ GT++ ++E D +A+G AT + H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT+V NLE + G RA+G
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAG 162
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT+V NLE + G RA+G
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAG 196
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPS 481
G+ P+GA+P GT + LE+ G L A+G F T + ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_Q00Y01 Cluster: Mitochondrial phosphate carrier protein;
n=3; Ostreococcus|Rep: Mitochondrial phosphate carrier
protein - Ostreococcus tauri
Length = 825
Score = 33.5 bits (73), Expect = 4.8
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +2
Query: 344 MPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAKRTRVKLPSGAKKVLPSSTEAWS 523
M E + N E D +G AT I H PD RTRV+L G L + +
Sbjct: 195 MAEFARMQNREPDAADTFIAGALAGAGATFITHPPDVIRTRVQL--GRMMALEGGGKPPA 252
Query: 524 VLLLEVDVIDQXYFETWKGISP-VQRQTLLLGICTWVLP*NPVAHPHGGG 670
+ LL++ V ++ W G P V R+T I TW + + V+ GGG
Sbjct: 253 ISLLKI-VREEGVRALWIGSLPRVARRTFQQAI-TWTM-FDVVSRALGGG 299
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 33.1 bits (72), Expect = 6.3
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 278 GQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATXIGHNPDAK 457
G + G A L++GN +P+ + G+ + N+E + +G L + + N I D
Sbjct: 104 GSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIY 162
Query: 458 RTRVKLPSGAKKVL 499
T VKLPSG K+L
Sbjct: 163 VT-VKLPSGEIKLL 175
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAG 211
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 260 PEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
PE Y+T +Y + EV +P GA + +EE G R R + G
Sbjct: 481 PETYHTSPHLYADLDISPEVTGTLPTGARTRAGLSAEVEEDLGGRARRGDSRG 533
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,087,862
Number of Sequences: 1657284
Number of extensions: 13786677
Number of successful extensions: 33991
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 32803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33951
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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