Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0787
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 147 4e-35
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 147 4e-35
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 147 4e-35
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 146 5e-35
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 146 5e-35
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 146 5e-35
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 146 5e-35
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 146 5e-35
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 146 5e-35
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 125 2e-28
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.93
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.93
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 0.93
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 0.93
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 31 2.8
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital... 31 2.8
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 147 bits (356), Expect = 4e-35
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 147 bits (356), Expect = 4e-35
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 147 bits (356), Expect = 4e-35
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 31 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 90
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 91 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 150
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 151 PRVRGVAM-NPVEHPFGGG 168
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 165 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFL 257
DIIHDPGRGAPLA V FRDPY+FK R ELF+
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 31
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 5e-35
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFATX 433
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+AT
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 434 IGHNPDAKRTRVKLPSGAKKVLPSSTEAWSVLLLEVDVIDQXYFETWKGISPVQRQTLLL 613
I HNP+ K+TRVKLPSG+KKV+ S+ A ++ ID+ + + + +
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Query: 614 GICTWVLP*NPVAHPHGGG 670
V NPV HP GGG
Sbjct: 197 PRVRGVAM-NPVEHPFGGG 214
Score = 133 bits (321), Expect = 6e-31
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 27 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 206
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 207 VHFRDPYKFKTRKELFL 257
V FRDPY+FK R ELF+
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 125 bits (301), Expect = 2e-28
Identities = 56/73 (76%), Positives = 64/73 (87%)
Frame = +3
Query: 39 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 218
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 219 DPYKFKTRKELFL 257
DPY+FK R ELF+
Sbjct: 61 DPYRFKKRTELFI 73
Score = 100 bits (239), Expect = 5e-21
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +2
Query: 254 LAPEGYYTGQFVYCGKXATLEVGNVMPVGAMPEGTIVCNLEEKXGDRGRLARASGNFA 427
+A EG +TGQFVYCGK A L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 73 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.93
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAG 211
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.93
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAG 211
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.1 bits (72), Expect = 0.93
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAG 208
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.1 bits (72), Expect = 0.93
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 320 GNVMPVGAMPEGTIVCNLEEKXGDRGRLARASG 418
G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAG 211
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 352 LRHSSNRHHIXNFKSCXLSTINKLACVVAFGSKKSSFLVLNLYGSRKCTTAKGAPLPGSW 173
L H ++ HI + N + V++ G+ S F + G TAK +PG++
Sbjct: 2808 LSHLGSKEHILELRPAIQPLNNHIRYVISQGNDDSVFRIHQRNGLSYLHTAKKKLMPGTY 2867
Query: 172 IISLTTPLMY 143
+ +T+ +Y
Sbjct: 2868 TLEITSIPLY 2877
>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
contractural arachnodactyly) variant protein.
Length = 1976
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 352 LRHSSNRHHIXNFKSCXLSTINKLACVVAFGSKKSSFLVLNLYGSRKCTTAKGAPLPGSW 173
L H ++ HI + N + V++ G+ S F + G TAK +PG++
Sbjct: 1873 LSHLGSKEHILELRPAIQPLNNHIRYVISQGNDDSVFRIHQRNGLSYLHTAKKKLMPGTY 1932
Query: 172 IISLTTPLMY 143
+ +T+ +Y
Sbjct: 1933 TLEITSIPLY 1942
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,593,092
Number of Sequences: 237096
Number of extensions: 2284162
Number of successful extensions: 3835
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3808
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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