Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0786
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55A60 Cluster: PREDICTED: similar to CG8938-PA,...    36   0.95 
UniRef50_UPI00003C07DB Cluster: PREDICTED: similar to motile spe...    33   5.1  
UniRef50_A0M1B5 Cluster: FixG-like iron-sulfur-cluster-binding p...    33   6.7  
UniRef50_A2EII6 Cluster: Adenylate and Guanylate cyclase catalyt...    33   8.8  

>UniRef50_UPI0000D55A60 Cluster: PREDICTED: similar to CG8938-PA,
           isoform A; n=3; Endopterygota|Rep: PREDICTED: similar to
           CG8938-PA, isoform A - Tribolium castaneum
          Length = 349

 Score = 35.9 bits (79), Expect = 0.95
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 469 QLNFFTVDRHTKLETLNLYNDYDFPMTFQEY 377
           +L F+T  + T  + L LYN YDFP+ +Q Y
Sbjct: 16  ELTFYTGSQSTHKQLLTLYNPYDFPVRYQVY 46


>UniRef50_UPI00003C07DB Cluster: PREDICTED: similar to motile sperm
           domain containing 1; n=1; Apis mellifera|Rep: PREDICTED:
           similar to motile sperm domain containing 1 - Apis
           mellifera
          Length = 251

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 466 LNFFTVDRHTKLETLNLYNDYDFPMTFQ 383
           + FF  D+ T  + L LYN YDFP+ F+
Sbjct: 21  ITFFLDDQSTHKQVLTLYNPYDFPIRFK 48


>UniRef50_A0M1B5 Cluster: FixG-like iron-sulfur-cluster-binding
           protein; n=16; cellular organisms|Rep: FixG-like
           iron-sulfur-cluster-binding protein - Gramella forsetii
           (strain KT0803)
          Length = 473

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -1

Query: 689 FNLGSGEGFWPRKFTALYMLMYICVWFIYLFTV 591
           FN+  GE FWP+ F    ++M I V FI LFTV
Sbjct: 72  FNI-FGEIFWPQDFYLFVLMMLIGVVFILLFTV 103


>UniRef50_A2EII6 Cluster: Adenylate and Guanylate cyclase catalytic
           domain containing protein; n=1; Trichomonas vaginalis
           G3|Rep: Adenylate and Guanylate cyclase catalytic domain
           containing protein - Trichomonas vaginalis G3
          Length = 1295

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 21/81 (25%), Positives = 40/81 (49%)
 Frame = +1

Query: 307 LCGIFGALLVYCAGFY*NVNF*LNILERSSGNHNHYINLKFLILYVDQL*RNLIVIFLLY 486
           L  + G LL+Y   +Y  V   LN+++++   +N Y +   L  Y D+  R L + F  Y
Sbjct: 38  LSSLSGVLLIYFILYYRKVRRQLNVIKQNQDEYNAYYDELGLCKYEDKALRYLKLGFQYY 97

Query: 487 LYKYVPYSLEYSSLCIDNFSN 549
              +  Y+  Y +  ++ F++
Sbjct: 98  CVCF--YNWSYVNYLLERFNS 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,194,921
Number of Sequences: 1657284
Number of extensions: 12901846
Number of successful extensions: 25846
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25836
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)