Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0786
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.45 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 650 FTALYMLMYICVWFIYLFTV 591
           + +L  L+++  +FIYLFTV
Sbjct: 137 YVSLLQLVFVFCYFIYLFTV 156


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 295 NKS*LCGIFGALLVY 339
           NK+ LCGIFG    Y
Sbjct: 352 NKATLCGIFGTTTTY 366


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 295 NKS*LCGIFGALLVY 339
           NK+ LCGIFG    Y
Sbjct: 352 NKATLCGIFGTTTTY 366


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 64  TFLLGLDFFINHHQN*VKIHKVNNS 138
           TF   +   +N H+N VK+ K +NS
Sbjct: 225 TFCNKIKHLVNLHKNLVKVAKDHNS 249


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 173 NHTK*FSGQSRNELFTL*ILT*FW*WLIKKS 81
           N+    S  SRN + T   +T  W WLI  S
Sbjct: 110 NYANASSVGSRNPIHTSSYMTGIWVWLINIS 140


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 173 NHTK*FSGQSRNELFTL*ILT*FW*WLIKKS 81
           N+    S  SRN + T   +T  W WLI  S
Sbjct: 343 NYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 173 NHTK*FSGQSRNELFTL*ILT*FW*WLIKKS 81
           N+    S  SRN + T   +T  W WLI  S
Sbjct: 343 NYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 650 FTALYMLMYICVWF 609
           +TA++ L Y+C +F
Sbjct: 17  YTAIHPLFYVCTFF 30


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 650 FTALYMLMYICVWF 609
           +TA++ L Y+C +F
Sbjct: 17  YTAIHPLFYVCTFF 30


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 400 NHNHYINLKFLILYVDQ 450
           NH  +IN   L+L+ DQ
Sbjct: 6   NHKKFINTTKLLLWCDQ 22


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 65  HFYWDWIFLLTITKIKLRFIK*TIHFV 145
           +FY+ +I LL +      FI  T+H +
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLL 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,049
Number of Sequences: 336
Number of extensions: 3991
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)