Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0785
(670 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P68650 Cluster: Major head protein; n=36; root|Rep: Maj... 118 1e-25
UniRef50_A6AUB7 Cluster: Phage major capsid protein E; n=3; Vibr... 93 7e-18
UniRef50_A1Z2R7 Cluster: Major capsid protein; n=5; Enterobacter... 78 2e-13
UniRef50_Q6UYI3 Cluster: Capsid protein E; n=1; Burkholderia pha... 40 0.054
UniRef50_Q2SI52 Cluster: Type II secretory pathway, pullulanase ... 37 0.51
UniRef50_A3HV44 Cluster: Sensor protein; n=1; Algoriphagus sp. P... 37 0.51
UniRef50_A6UA11 Cluster: Phage major capsid protein E; n=1; Sino... 36 1.2
UniRef50_A2YJH2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;... 35 1.5
UniRef50_UPI0000DB75A8 Cluster: PREDICTED: similar to CG9056-PA;... 34 2.7
UniRef50_Q5N2F5 Cluster: Gamma-glutamyltranspeptidase; n=2; Syne... 34 2.7
UniRef50_Q62IH9 Cluster: Putative uncharacterized protein; n=4; ... 34 3.6
UniRef50_Q4ZWI5 Cluster: Major royal jelly protein; n=9; Bacteri... 34 3.6
UniRef50_Q0C5V2 Cluster: TRNA(Ile)-lysidine synthetase; n=1; Hyp... 34 3.6
UniRef50_Q57UM9 Cluster: Mitochondrial DNA polymerase I protein ... 34 3.6
UniRef50_UPI00006D92E1 Cluster: COG4668: Mannitol/fructose-speci... 33 4.7
UniRef50_A0U6W9 Cluster: Putative uncharacterized protein precur... 33 4.7
UniRef50_Q4QIN4 Cluster: Putative uncharacterized protein; n=3; ... 33 4.7
UniRef50_UPI0000383B56 Cluster: COG2844: UTP:GlnB (protein PII) ... 33 6.2
UniRef50_A3C0W0 Cluster: Putative uncharacterized protein; n=3; ... 33 6.2
UniRef50_Q72A29 Cluster: Major head protein; n=2; Desulfovibrio ... 33 8.2
UniRef50_Q727I6 Cluster: Major head protein; n=1; Desulfovibrio ... 33 8.2
UniRef50_Q6K5L3 Cluster: Putative uncharacterized protein P0677G... 33 8.2
UniRef50_Q968L5 Cluster: Variable surface glycoprotein; n=1; Try... 33 8.2
>UniRef50_P68650 Cluster: Major head protein; n=36; root|Rep: Major
head protein - Bacteriophage P21 (Bacteriophage 21)
Length = 342
Score = 118 bits (284), Expect = 1e-25
Identities = 59/108 (54%), Positives = 72/108 (66%)
Frame = -3
Query: 569 PGYVKRKHEVTPPDXRASHADERSAESGGPAYRRRRIIMQNMRDEEVAIAQVEEMQAVSA 390
PGYVK KHE E ++ PAYRR RII N++ EE AI QVEEMQAV+A
Sbjct: 75 PGYVKPKHEFNYQQAVERLPGEDPSQLNDPAYRRLRIITDNLKQEEHAIVQVEEMQAVNA 134
Query: 389 VLKCRYTMTGEAFDPVEVDMGRSEENNITQSGGTEWSKRDKSTYDRPT 246
VL +YTM G+ F+ +EVD GRS +NNITQ G EWSK+D+ T+D PT
Sbjct: 135 VLYGKYTMEGDQFEKIEVDFGRSTKNNITQGSGKEWSKQDRDTFD-PT 181
Score = 104 bits (250), Expect = 2e-21
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 PTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDLGKAV 76
PT DI+ Y ASG+VNI + D W L FK +EKLDTRRGSNS+LETAVKDLG V
Sbjct: 180 PTHDIDLYCDLASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVV 239
Query: 75 SYKGMYGDVAIVVYSGQYV-ENGVKK 1
S+KG YGD+AIVV Y+ E+G++K
Sbjct: 240 SFKGYYGDLAIVVAKTSYIAEDGIEK 265
>UniRef50_A6AUB7 Cluster: Phage major capsid protein E; n=3;
Vibrio|Rep: Phage major capsid protein E - Vibrio
harveyi HY01
Length = 345
Score = 92.7 bits (220), Expect = 7e-18
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = -2
Query: 246 DIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDLGKAVSYK 67
DIE +A + G+ N+I+ DPK WAL R F+ + L+TRRGSNS+LETA+KDLG VS K
Sbjct: 186 DIETWAAISEGLTNVIITDPKTWALMRKFEKFNDALETRRGSNSQLETALKDLGATVSVK 245
Query: 66 GMYGDVAIVVYSGQYVE 16
G GDV I+V +Y++
Sbjct: 246 GNLGDVTIIVVDEEYID 262
Score = 66.1 bits (154), Expect = 7e-10
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = -3
Query: 584 TCEFAPGYVKRKHEVTPPDXRASHADERSAESGGPAYRRRRIIMQNMRDEEVAIAQVEEM 405
T F P YVK KH VT E S R+ I+MQN+ EE A+ EE+
Sbjct: 72 TSSFKPAYVKSKHAVTANQSVKRRPGEPITGSMSAGDRQNAIVMQNLDIEEQAVRDREEL 131
Query: 404 QAVSAVLKCRYTMTGEAFD-PVEVDMGRSEENNITQSGGTEWSKRDKSTYD 255
V + + D P E+D GR+ +N IT +W+ +D +TYD
Sbjct: 132 MCAEMVYDGKTVIDSPYIDKPYEIDAGRNADNMITLLSAAQWANKDFATYD 182
>UniRef50_A1Z2R7 Cluster: Major capsid protein; n=5;
Enterobacteriaceae|Rep: Major capsid protein -
Escherichia coli
Length = 293
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 PTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDLGKAV 76
P DIE YA A N+++ + W RSFK +E D RGS S E A K+LG+ V
Sbjct: 131 PIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAELACKNLGEVV 190
Query: 75 SYKGMYGDVAIVVYSGQYVE-NGVKK 1
S+KG GD+A++VYSG+Y + +G +K
Sbjct: 191 SFKGYLGDLALIVYSGKYTDSDGTEK 216
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/110 (37%), Positives = 56/110 (50%)
Frame = -3
Query: 584 TCEFAPGYVKRKHEVTPPDXRASHADERSAESGGPAYRRRRIIMQNMRDEEVAIAQVEEM 405
T PGY+K KHE+ P A E A+ P YRR R+I NMR + AI E
Sbjct: 21 TSTIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEW 80
Query: 404 QAVSAVLKCRYTMTGEAFDPVEVDMGRSEENNITQSGGTEWSKRDKSTYD 255
AV+AV + + GE + E+D E I Q+ G +WS++DK +D
Sbjct: 81 LAVNAVTTGKNIIEGEGIERYEIDWKIPENCIIEQAKGKKWSEQDKDMHD 130
>UniRef50_Q6UYI3 Cluster: Capsid protein E; n=1; Burkholderia phage
BcepNazgul|Rep: Capsid protein E - Burkholderia phage
BcepNazgul
Length = 346
Score = 39.9 bits (89), Expect = 0.054
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Frame = -3
Query: 587 STCEFAPGYVKRKHEVTPPDXRASHADERSAESGGPAYRR-RRIIMQNMRDEEVAIAQVE 411
+T F P YVK K + P A E+ G R + ++ + ++ I
Sbjct: 68 TTKTFRPAYVKPKDVINPNRTLKRRAGEQPIIGGMSLQERFQAVVADSQLEQRQRIENRI 127
Query: 410 EMQAVSAVLKCRYTMTGEAFDPVEVDMGRSEENNITQSGGTEWSKRDKSTYD 255
E A + + GEAF VD GR + +GG W D++T D
Sbjct: 128 EWMCAMATIYGYVDVVGEAFPMQRVDFGRDPALTVQLTGGAAW---DQATSD 176
>UniRef50_Q2SI52 Cluster: Type II secretory pathway, pullulanase
PulA and related Glycosidase; n=1; Hahella chejuensis
KCTC 2396|Rep: Type II secretory pathway, pullulanase
PulA and related Glycosidase - Hahella chejuensis
(strain KCTC 2396)
Length = 335
Score = 36.7 bits (81), Expect = 0.51
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Frame = -3
Query: 593 RASTCE-FAPGYVKRKHEVTPPDXRASHADERSAESGGPAYRRRRIIMQNMRDEEVAIAQ 417
R ST + F Y+K K V P A E + PA R I + + +I +
Sbjct: 65 RGSTLKKFKAAYIKPKTPVLPNRPLKRRAGEPIGGTLTPAQRMNAIRADILNSQMDSIDR 124
Query: 416 VEEMQAVSAVLKCRYTMTGEAFDPVEVDMGRSEENNITQSGGTEWSKRDKST 261
E A SA+ + ++GE + VD GR + SGG + ST
Sbjct: 125 RMEWMAASALRTGQIIVSGEKYPTSVVDFGRDPNLTVDVSGGAAAWDQSTST 176
Score = 35.9 bits (79), Expect = 0.88
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 PTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDLGKAV 76
P +D+E N ++ F +KE ++TRRGS+++LETA
Sbjct: 177 PKEDLEDIFALMKAPCNYVIGGRGAINAFMKHADIKELMETRRGSSTQLETA--PTVNLA 234
Query: 75 SYKGMYGDVAIVV--YSGQYV-ENGVKK 1
YKG G V Y G Y E+G ++
Sbjct: 235 DYKGRLGSAGPEVWSYQGYYTDESGTQQ 262
>UniRef50_A3HV44 Cluster: Sensor protein; n=1; Algoriphagus sp.
PR1|Rep: Sensor protein - Algoriphagus sp. PR1
Length = 1638
Score = 36.7 bits (81), Expect = 0.51
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = -3
Query: 455 MQNMRDEEVAIAQVEEMQAVSAVLKCRYTMTGEAFDPVEVDMGRSEENNI----TQSGGT 288
++ +R +A+ + EE+ V+AVL ++ G + + + + R EE NI T+ GG
Sbjct: 418 LERVRARTMAMHKSEELGEVAAVLFDQFEALGATPERLNIGIVREEERNIEWWSTEQGGK 477
Query: 287 EWSKRDKSTYDRP-TISK 237
+ K T D P TISK
Sbjct: 478 QIDHLFKGTIDEPTTISK 495
>UniRef50_A6UA11 Cluster: Phage major capsid protein E; n=1;
Sinorhizobium medicae WSM419|Rep: Phage major capsid
protein E - Sinorhizobium medicae WSM419
Length = 343
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/100 (22%), Positives = 38/100 (38%)
Frame = -3
Query: 575 FAPGYVKRKHEVTPPDXRASHADERSAESGGPAYRRRRIIMQNMRDEEVAIAQVEEMQAV 396
F P YVK ++ + P E PA R + + D++ I + EE
Sbjct: 75 FTPAYVKPQNTLRPGGNMIRMPGEPIGGRNSPAQRYAYNLATIIDDQDQRITRREEFMCS 134
Query: 395 SAVLKCRYTMTGEAFDPVEVDMGRSEENNITQSGGTEWSK 276
+ + + GE + V+ GR+ I +G W +
Sbjct: 135 QVIRTGQVIVEGEDYPTQTVNFGRNAALTIALAGAARWGE 174
>UniRef50_A2YJH2 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 77
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +1
Query: 97 HRCLQLGIRA--TTGIQLLLDGFEGTEQRPAFRIE 195
HRCL+L +R+ TTG+QL L GF G+ Q A ++
Sbjct: 29 HRCLELHLRSGVTTGVQLRLLGFHGSAQGTAVELQ 63
>UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 892
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -1
Query: 319 RRITSRSPAARSGASVTSPRMTDRRYRSLRAERQRCGEYHRVRSERLGAVPFLQSRQGEA 140
RR+ S G S + P RR RS + R+ CG + S +G P LQSR +
Sbjct: 661 RRLASTPGPDHRGRSASMPGPAGRRRRSSASRRRACGPGPALSSGAVGLGPRLQSRSPTS 720
Query: 139 G 137
G
Sbjct: 721 G 721
>UniRef50_UPI0000DB75A8 Cluster: PREDICTED: similar to CG9056-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG9056-PA
- Apis mellifera
Length = 1259
Score = 34.3 bits (75), Expect = 2.7
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 23 YCPEYTTMATSPYIPL*DTALPR-SFTAVSSSELEPRRVSSFSLTALKERNSAQPFGSNT 199
Y P YT + SPY+P A+P S +A S +E+ R S T + ++ QP G+NT
Sbjct: 433 YTP-YTALNHSPYLP---PAVPSPSHSASSRAEVRGSRASP--CTNISKQ---QPIGNNT 483
Query: 200 MIFTTPLAFSA*ASISSVGHTWT 268
TPL+ + +S++ +T T
Sbjct: 484 TNHNTPLSAATTTCVSTITNTVT 506
>UniRef50_Q5N2F5 Cluster: Gamma-glutamyltranspeptidase; n=2;
Synechococcus elongatus|Rep:
Gamma-glutamyltranspeptidase - Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1)(Anacystis nidulans)
Length = 535
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 467 GGGKRVRQ-ILRISHRHATHGX-LAESLHASA*HIPAQIHMWKPGY 598
GG R+R IL++ HR A G LAE++ A H A + W+PG+
Sbjct: 436 GGSNRIRTAILQVIHRWAVEGYALAEAIAAPRLHWEAGVLNWEPGW 481
>UniRef50_Q62IH9 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 218
Score = 33.9 bits (74), Expect = 3.6
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -1
Query: 430 WPLLRSKRCRQFLPCLSADTP*PVKPSIRLRWIWAAVRRITSRSPAARSGASVTSP 263
WP + S+RCR++LP A P P+ P +R A RRI S P R+ S P
Sbjct: 92 WPPVCSRRCRRYLPAPPA-LPLPLPPPMR-----DARRRIVSGGPDGRARLSPCRP 141
>UniRef50_Q4ZWI5 Cluster: Major royal jelly protein; n=9;
Bacteria|Rep: Major royal jelly protein - Pseudomonas
syringae pv. syringae (strain B728a)
Length = 415
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 123 SNSELETAVKDLGKAVSYKGMYGDVAIVVYSGQYVENGVKK 1
+ +L AVKDLG+ G+ D VY+G Y +N ++K
Sbjct: 306 TEQQLTNAVKDLGEKGPSDGLEADSEGAVYAGDYEDNSIRK 346
>UniRef50_Q0C5V2 Cluster: TRNA(Ile)-lysidine synthetase; n=1;
Hyphomonas neptunium ATCC 15444|Rep: TRNA(Ile)-lysidine
synthetase - Hyphomonas neptunium (strain ATCC 15444)
Length = 367
Score = 33.9 bits (74), Expect = 3.6
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 266 TCHACSTPCRRTA*CYSPHCGPYPPQPDRRLHRSWCICT*ARQKLPASLRPEQW 427
T C RRT C P CGP PP RL + I + ++ AS E +
Sbjct: 306 TLGGCRITARRTHICLKPECGPLPPGTAARLAATQAILSGNPNEIAASAGKESF 359
>UniRef50_Q57UM9 Cluster: Mitochondrial DNA polymerase I protein C;
n=2; Trypanosoma brucei|Rep: Mitochondrial DNA
polymerase I protein C - Trypanosoma brucei
Length = 1649
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -1
Query: 331 WAAVRRITSRSPA--ARSGASVTSPRMTDRRYRSLRAERQRCGEYHRVRSE 185
+A+ R SR PA ARSGAS +PR R + L++ ++ GE+ S+
Sbjct: 66 FASTRATNSRKPARVARSGASSRAPRKGPRHSQGLKSSQESEGEFMATTSD 116
>UniRef50_UPI00006D92E1 Cluster: COG4668: Mannitol/fructose-specific
phosphotransferase system, IIA domain; n=1; Pseudomonas
aeruginosa 2192|Rep: COG4668: Mannitol/fructose-specific
phosphotransferase system, IIA domain - Pseudomonas
aeruginosa 2192
Length = 331
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 194 SIRKAGRCSVPSKPSRRSWIPVVALIPSWRQR*KTWAKRCPIRGCMAMWPSSCIPDS 24
S R C RSW +A +P+ R+R ++W + P R A WP++ P S
Sbjct: 272 SRRSVASCRRTGPARERSWPTRMACMPARRRRWRSWPRVSPARSGYA-WPTASRPPS 327
>UniRef50_A0U6W9 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia cenocepacia MC0-3|Rep:
Putative uncharacterized protein precursor -
Burkholderia cenocepacia MC0-3
Length = 479
Score = 33.5 bits (73), Expect = 4.7
Identities = 28/76 (36%), Positives = 32/76 (42%)
Frame = -1
Query: 319 RRITSRSPAARSGASVTSPRMTDRRYRSLRAERQRCGEYHRVRSERLGAVPFLQSRQGEA 140
R + R AR A V +P DRR RA RQR G R R A + +G A
Sbjct: 284 RHVRERRGNARRRA-VLAPHEIDRRRIRCRARRQRAGGRERSAEHRAAAKCAGPADEGAA 342
Query: 139 GYPSWL*FRAGDSGER 92
YP FR G S R
Sbjct: 343 RYP----FRCGRSDGR 354
>UniRef50_Q4QIN4 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1196
Score = 33.5 bits (73), Expect = 4.7
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 289 RSGASVTSPRMTDRRYR-SLRAERQRCGEYHRVRSERLGAVPFLQSRQ 149
R+GA++ S RR R LR + Q E+HRVR G P SRQ
Sbjct: 204 RNGAALQSSGALTRRQRHQLRQQAQEAREHHRVRRHMAGFDPDFLSRQ 251
>UniRef50_UPI0000383B56 Cluster: COG2844: UTP:GlnB (protein PII)
uridylyltransferase; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG2844: UTP:GlnB (protein
PII) uridylyltransferase - Magnetospirillum
magnetotacticum MS-1
Length = 394
Score = 33.1 bits (72), Expect = 6.2
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = -1
Query: 304 RSPAA-RSGASVTSPRMTDRR---YRSLRAERQRCGEYHRVRSERLGAVPFLQSRQGEAG 137
R+PA R A + PR RR + L +RQ CG HR R R+G P RQ AG
Sbjct: 314 RAPAEDRRAARLRRPRRPVRRRALHEGLFPDRQGCGRPHRHRLRRVGGAP----RQAHAG 369
>UniRef50_A3C0W0 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 560
Score = 33.1 bits (72), Expect = 6.2
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Frame = +2
Query: 38 TTMATSPYIPL*DTALPRSFT-AVSS-SELEPRRVSSFSLTALKERNSAQPFGSNTMIFT 211
TT ++SP + ++ S T AV + S RR S FS T + S ++ T
Sbjct: 43 TTTSSSPPLRSSPSSATGSRTDAVEAPSSRHRRRRSRFSATCISWARSCTARCTSCTSGT 102
Query: 212 TPLAFSA*ASISSVGHTWTCHACSTPCRRTA*CYSPHCGPYPPQPDRRLHRSWCICT*AR 391
P A + S G W+C P RRT C P PP R S C A
Sbjct: 103 APTAACSSCSSGGAGR-WSCPR--RPPRRT--CTGTTTSPSPPARSSRRRTS---CRTAP 154
Query: 392 QKLPASLRPEQWP 430
+ P+ EQWP
Sbjct: 155 RTSPSPPFGEQWP 167
>UniRef50_Q72A29 Cluster: Major head protein; n=2; Desulfovibrio
vulgaris subsp. vulgaris|Rep: Major head protein -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 341
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -2
Query: 255 PTDDIEAY--ALNASGV-VNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDLG 85
P+ D E + + SG N+ V K W FR A+KE+LD +R +L V+ +
Sbjct: 184 PSGDFEEWNALVQESGFPANVCVMGDKAWTAFRKNPAIKEELDNKRIELGQLGPNVQRMY 243
Query: 84 K 82
K
Sbjct: 244 K 244
>UniRef50_Q727I6 Cluster: Major head protein; n=1; Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough|Rep: Major
head protein - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 334
Score = 32.7 bits (71), Expect = 8.2
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = -2
Query: 255 PTDDIEAYAL---NASGVV-NIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDL 88
P D+EA+ +A+G ++++ F S VKE+LD RR L D
Sbjct: 175 PNADLEAWTKKTKDATGYAPDVLILGTTACNAFLSHAKVKERLDLRRVEGGLL---APDF 231
Query: 87 GKAVSYKGMYGDVAIVVYSGQYVE 16
A +KG YG + + Y G + +
Sbjct: 232 --AADFKGYYGGLQVYTYGGSFFD 253
>UniRef50_Q6K5L3 Cluster: Putative uncharacterized protein
P0677G01.44; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0677G01.44 - Oryza sativa subsp. japonica (Rice)
Length = 429
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 48 PHRHTSPYRTPL-CPGLSPLSPARN*SHDGYPASP 149
PH HT P+ + CP SP SPA++ H +P SP
Sbjct: 21 PHAHTRPWDSAAPCPPHSPTSPAKSGRH--FPTSP 53
>UniRef50_Q968L5 Cluster: Variable surface glycoprotein; n=1;
Trypanosoma evansi|Rep: Variable surface glycoprotein -
Trypanosoma evansi
Length = 487
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 470 RRRIIMQNMRDEEVAIA-QVEEMQAVSAVLKCRYTMTGEA-FDPVEVDMGRSEENNITQS 297
R+ + Q R++++A+A Q+ E+ +C+ T EA EV +++ +S
Sbjct: 339 RKSKLAQARREQQIAVAKQLGEVPTQKQQSECKATSNKEANLKDTEVCNKTKKKSECKES 398
Query: 296 GGTEWSKRDKSTYD 255
G +W+ DKS D
Sbjct: 399 DGCKWTSTDKSEGD 412
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,795,831
Number of Sequences: 1657284
Number of extensions: 16517696
Number of successful extensions: 53628
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 50673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53479
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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