Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0784
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.8  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    25   2.8  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.5  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 347 SKRYSLKVIQVYAPTQTHPDDEVEALYEDVSRA 445
           +KRYS  V    AP+++   DE  ++Y+ ++ A
Sbjct: 359 TKRYSQTVESTNAPSRSPGPDEEPSVYKSLAEA 391


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 464 HFTVVMGDFNAKLGCEAMMS*KWVS 538
           HFT +  D  AK+GC AM +  WVS
Sbjct: 181 HFTQMASDQTAKIGC-AMQN--WVS 202


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 166 QKSEDRERIR*PCSPATCSFTERESRSPKV 255
           Q++E  E +     P+T   TE ES  PK+
Sbjct: 27  QEAEHGETVPATPEPSTTEATEEESPPPKI 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,978
Number of Sequences: 2352
Number of extensions: 16748
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)