Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0783
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   6.5  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 430  NNFGVSIQEDTLAEIQSVGS 489
            N+ GVS+Q+D  A I+S GS
Sbjct: 1179 NHRGVSLQDDDTASIKSYGS 1198


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 539 APGYEIS*DLTKKAAASDPTDCISASVSSCMETPKLFPS 423
           APG +   +   KAA    TD   A   SC+ET   FP+
Sbjct: 497 APGLDGIPNAAVKAAILAYTDVFQALYQSCLET-ATFPA 534


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 173 CLNPDVRP-INSDFESLMSLVIHXXXXXXXXXXXXSNAPPLVSKNLCS 33
           C NP +   +N+ F S   LV+H             + PP +++N+ S
Sbjct: 561 CYNPIIYCYMNARFRSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGS 608


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,771
Number of Sequences: 2352
Number of extensions: 14154
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)