Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0783
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein. 133 5e-31
BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome, ma... 133 5e-31
BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome, ma... 133 5e-31
BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome, ma... 133 5e-31
BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome, ma... 133 5e-31
U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen pr... 119 8e-27
U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein. 81 5e-15
L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein. 81 5e-15
CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein. 81 5e-15
BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome, ma... 81 5e-15
BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome, ma... 81 5e-15
BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome, ma... 81 5e-15
AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA... 81 5e-15
CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein. 80 8e-15
CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein. 70 9e-12
D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA2... 69 2e-11
CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein. 69 2e-11
BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome, ma... 69 2e-11
BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome, ma... 69 2e-11
BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome, ma... 69 2e-11
AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing... 69 2e-11
AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA... 69 2e-11
U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen pr... 45 3e-04
BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein. 30 6.4
AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein pr... 30 6.4
AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein pr... 30 6.4
AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein myop... 30 6.4
AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein. 30 6.4
AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein. 30 6.4
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 30 6.4
BC068585-1|AAH68585.1| 538|Homo sapiens HERV-FRD provirus ances... 30 8.5
AY358244-1|AAQ88611.1| 538|Homo sapiens GLLL6191 protein. 30 8.5
AK123938-1|BAC85731.1| 538|Homo sapiens protein ( Homo sapiens ... 30 8.5
>CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein.
Length = 254
Score = 133 bits (322), Expect = 5e-31
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 447
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 448 IQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXE-L*GLDEKGYLS 624
IQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY + +DEK Y+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 625 LGRYVRNRIR 654
L R + + +R
Sbjct: 217 L-RLIISELR 225
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + +AE + FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSEAEDWVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 133 bits (322), Expect = 5e-31
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 447
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 448 IQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXE-L*GLDEKGYLS 624
IQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY + +DEK Y+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 625 LGRYVRNRIR 654
L R + + +R
Sbjct: 217 L-RLIISELR 225
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 133 bits (322), Expect = 5e-31
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 447
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 448 IQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXE-L*GLDEKGYLS 624
IQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY + +DEK Y+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 625 LGRYVRNRIR 654
L R + + +R
Sbjct: 217 L-RLIISELR 225
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 133 bits (322), Expect = 5e-31
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 447
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 448 IQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXE-L*GLDEKGYLS 624
IQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY + +DEK Y+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 625 LGRYVRNRIR 654
L R + + +R
Sbjct: 217 L-RLIISELR 225
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 133 bits (322), Expect = 5e-31
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 447
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 448 IQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXE-L*GLDEKGYLS 624
IQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY + +DEK Y+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 625 LGRYVRNRIR 654
L R + + +R
Sbjct: 217 L-RLIISELR 225
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen
protein.
Length = 267
Score = 119 bits (287), Expect = 8e-27
Identities = 63/143 (44%), Positives = 95/143 (66%), Gaps = 14/143 (9%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL-------------LKMWISFM 408
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTPSGKGPHICFDLQVKMWVQLL 156
Query: 409 IPKIEDGNNFGVSIQEDTLAEIQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYX 588
IP+IEDGNNFGVSIQE+T+AE+++V SEAA++ + AK+VS++A+YPH++DY
Sbjct: 157 IPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYR 216
Query: 589 E-L*GLDEKGYLSLGRYVRNRIR 654
+ +DEK Y+SL R + + +R
Sbjct: 217 RTVTEIDEKEYISL-RLIISELR 238
Score = 56.8 bits (131), Expect = 6e-08
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 RDVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPT 187
++V KV +++ + KAE L+ FP+K+++L+ L+ +L+ +H D+N+P+P
Sbjct: 9 QEVKLKVDSFRERITSKAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPD 68
Query: 188 PPATSNNE-----PNAKRQRLDSSE 247
P +N+ P K++RLD E
Sbjct: 69 PILLTNSHDGLDGPTYKKRRLDECE 93
>U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA28
alpha protein.
Length = 249
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 79.8 bits (188), Expect = 8e-15
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 471
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 472 IQSVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGY 618
+ S+ ++ F + V++ A+ PH+ DY +L LDE Y
Sbjct: 160 MTSLHTKLEGFHSQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEY 209
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 23 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 202
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 203 NNEPNAKRQRLDSSE 247
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 69.7 bits (163), Expect = 9e-12
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL-*GLDEKGYLSL 627
+V ++ AF V++ ++ H+ DY L DE Y+ L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYVEL 202
Score = 50.4 bits (115), Expect = 6e-06
Identities = 22/74 (29%), Positives = 44/74 (59%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+V K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EVRKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA28
suunit beta protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing
protein 22 protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA28
beta protein.
Length = 239
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 298 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 477
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 478 SVGSEAAAFFVKSHDISYPGAKIVSQVAQYPHIDDYXEL 594
+V ++ AF V++ ++ H+ DY L
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRAL 190
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 11 DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
+ K+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP P
Sbjct: 12 EARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDP 71
Query: 191 PATSNNEPNAKRQR 232
P + K+++
Sbjct: 72 PPKDDEMETDKQEK 85
>U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen
protein.
Length = 54
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 268 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSN 381
+GT+V+V+PNG + N+ L D+I VKP IR L+E N
Sbjct: 16 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 53
>BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein.
Length = 658
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 238
Query: 257 TQ 262
Q
Sbjct: 239 EQ 240
>AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein
protein.
Length = 1391
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 250 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 309
Query: 257 TQ 262
Q
Sbjct: 310 EQ 311
>AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein
protein.
Length = 1320
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 238
Query: 257 TQ 262
Q
Sbjct: 239 EQ 240
>AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1320
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 238
Query: 257 TQ 262
Q
Sbjct: 239 EQ 240
>AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein.
Length = 507
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 238
Query: 257 TQ 262
Q
Sbjct: 239 EQ 240
>AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein.
Length = 1320
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 77 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
K K+ N++++ ++ +LS+ + ++PIP P T +NE N ++ ++
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKRREA 238
Query: 257 TQ 262
Q
Sbjct: 239 EQ 240
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 134 QNRNLSDVHQDLNIPIPTPPATSN-----NEPNAKRQRLDSSELSTTQP*K 271
Q +L H L++PI PP TS + + + +D+S+++TT P K
Sbjct: 782 QKTSLPSAHDFLSLPIMVPPDTSTLVSSASAASLSKPAIDTSDMNTTPPSK 832
>BC068585-1|AAH68585.1| 538|Homo sapiens HERV-FRD provirus
ancestral Env polyprotein protein.
Length = 538
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = -3
Query: 467 ASVSSCMETPKLFPSSIFGIINEIHILSKFESSTSSLMCGLTRCIRSLSGLLQGTEPFGS 288
A + C++ L ++ + ++++ +E+ T T C++ L+G+ T G
Sbjct: 210 ADYNQCLQISNLSSTAEWVLLDQTRNSLFWENKTKGANQSQTPCVQVLAGMTIATSYLG- 268
Query: 287 T*TRVPSMVELWITPMSPVFDV*HLAHCLTSQ 192
+ ++ E + T ++P+F H++ CL +Q
Sbjct: 269 ----ISAVSEFFGTSLTPLFHF-HISTCLKTQ 295
>AY358244-1|AAQ88611.1| 538|Homo sapiens GLLL6191 protein.
Length = 538
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = -3
Query: 467 ASVSSCMETPKLFPSSIFGIINEIHILSKFESSTSSLMCGLTRCIRSLSGLLQGTEPFGS 288
A + C++ L ++ + ++++ +E+ T T C++ L+G+ T G
Sbjct: 210 ADYNQCLQISNLSSTAEWVLLDQTRNSLFWENKTKGANQSQTPCVQVLAGMTIATSYLG- 268
Query: 287 T*TRVPSMVELWITPMSPVFDV*HLAHCLTSQ 192
+ ++ E + T ++P+F H++ CL +Q
Sbjct: 269 ----ISAVSEFFGTSLTPLFHF-HISTCLKTQ 295
>AK123938-1|BAC85731.1| 538|Homo sapiens protein ( Homo sapiens
cDNA FLJ41944 fis, clone PLACE6012574. ).
Length = 538
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = -3
Query: 467 ASVSSCMETPKLFPSSIFGIINEIHILSKFESSTSSLMCGLTRCIRSLSGLLQGTEPFGS 288
A + C++ L ++ + ++++ +E+ T T C++ L+G+ T G
Sbjct: 210 ADYNQCLQISNLSSTAEWVLLDQTRNSLFWENKTKGANQSQTPCVQVLAGMTIATSYLG- 268
Query: 287 T*TRVPSMVELWITPMSPVFDV*HLAHCLTSQ 192
+ ++ E + T ++P+F H++ CL +Q
Sbjct: 269 ----ISAVSEFFGTSLTPLFHF-HISTCLKTQ 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,121,011
Number of Sequences: 237096
Number of extensions: 2023304
Number of successful extensions: 4953
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4943
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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