Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0782
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IGN6 Cluster: HDC05827; n=4; Endopterygota|Rep: HDC05...    44   0.001
UniRef50_Q54U60 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q7RFM3 Cluster: Putative uncharacterized protein PY0468...    32   8.2  

>UniRef50_Q6IGN6 Cluster: HDC05827; n=4; Endopterygota|Rep: HDC05827
           - Drosophila melanogaster (Fruit fly)
          Length = 88

 Score = 44.4 bits (100), Expect = 0.001
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = +1

Query: 10  TPYNKXIEDQRVDRLTDEVLK-DPTNVKKLKYQENVLGKNVSPSLE 144
           TPY+  I++ R  RLT+E L  D  NV+KL+    VL +N+SPSL+
Sbjct: 40  TPYSPSIQELRAKRLTEESLNTDAANVEKLRLSSPVLERNLSPSLQ 85


>UniRef50_Q54U60 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1129

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +2

Query: 314 NVAISAVHLLR*IISLFINQFHFPNSNSDFETNRLGFFVHIVINEIN 454
           N  I+ +HL++   SL IN F F  SNSDF+ N     +   IN+IN
Sbjct: 621 NKTINIIHLIK---SLKINNFKFEGSNSDFKLNFNLKLIKNFINQIN 664


>UniRef50_Q7RFM3 Cluster: Putative uncharacterized protein PY04683;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04683 - Plasmodium yoelii yoelii
          Length = 840

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 16  YNKXIEDQRVD--RLTDEVLKDPTNVKKLKYQENVLGKNVSPSLEKD*SYKKEFISFKPD 189
           Y+  +ED+  D  ++ D V  +   +K +KY+ N   +N   +LE         I  K  
Sbjct: 527 YHLFVEDKIKDNAKIVDNVTLEQNKIKNVKYELNEKNRNYDNTLESSYLNHLNDIYIKLS 586

Query: 190 SCIELKI 210
           +C E KI
Sbjct: 587 NCFERKI 593


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,267,207
Number of Sequences: 1657284
Number of extensions: 7037315
Number of successful extensions: 17565
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17562
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)