Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0781
(708 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 113 3e-24
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 113 3e-24
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 113 5e-24
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 109 7e-23
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 102 8e-21
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 76 7e-13
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 1e-12
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 56 9e-07
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 54 5e-06
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 51 3e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 48 3e-04
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 44 0.003
UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera... 40 0.079
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 39 0.10
UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forse... 39 0.10
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 38 0.24
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.24
UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1; ... 37 0.42
UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8; Bacteroidales|... 36 0.98
UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barre... 36 0.98
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 0.98
UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1; Flav... 35 1.7
UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barre... 35 2.3
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 34 3.9
UniRef50_Q84CN9 Cluster: 3-phytase; n=4; Enterobacteriaceae|Rep:... 33 5.2
UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae ba... 33 5.2
UniRef50_Q1QJ70 Cluster: Uroporphyrinogen III synthase HEM4; n=1... 33 9.1
UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiel... 33 9.1
UniRef50_A0X534 Cluster: Phage integrase family protein; n=1; Sh... 33 9.1
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 113 bits (273), Expect = 3e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+ NGEW+
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 113 bits (273), Expect = 3e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+ NGEW+
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 113 bits (271), Expect = 5e-24
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR NGEW+
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 109 bits (262), Expect = 7e-23
Identities = 56/68 (82%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Frame = -1
Query: 678 CSGA*-ARRVCVTRNVTATLAQALAPDPFAFFPSFHATFAAFPRQALNRGLPLGFRIYAL 502
CSGA A V VTR+VTATLA ALAP PFAFFPSF ATFA FPRQALNRGLPLGFR AL
Sbjct: 5 CSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRFSAL 64
Query: 501 RHLDPKKL 478
RHLDPKKL
Sbjct: 65 RHLDPKKL 72
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 102 bits (245), Expect = 8e-21
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 218
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 76.2 bits (179), Expect = 7e-13
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEW 233
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q +T NG W
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +1
Query: 76 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAK 180
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISE 39
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 64.9 bits (151), Expect = 2e-09
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 78 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
LA +L R DW+NP +T +NRL +H P WR+++ AR PS + + +GEWQ
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 87 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNG 227
VL R DW N +T LNRL AHP FASWR+ AR + PS + R +G
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 53.6 bits (123), Expect = 5e-06
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +3
Query: 165 WRNSEEARTDRPSQQLRTCNGEWQIV 242
WRNSEEARTDRPSQQLR+ NGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +3
Query: 87 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEW 233
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+ ++ NG+W
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK-KSLNGQW 54
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -2
Query: 242 YNLPFAIAGAQLLGRAIGAGLFAITPAGERG 150
+ PFAI AQLLGRAIGAGLFAITP E G
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 96 RRDWENPGVTQLNRLAAHPPFASWRNSEEART-DRPSQQLRTCNGEWQ 236
+ DWENP V Q+NRL A S+ E+A T DR +++ NG+W+
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQSLNGQWK 78
>UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Beta-D-galactosidase -
Lentisphaera araneosa HTCC2155
Length = 991
Score = 39.5 bits (88), Expect = 0.079
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 105 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQIVSVN 251
WENP LN LA PP S+ + E+A S + + NG W N
Sbjct: 6 WENPQFVSLNTLAPRPPLYSFDSLEKALEQDQSAYIHSLNGSWNFKLFN 54
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 87 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
+L +DW+NP + + + H P S+R +EAR D + ++ NG+W+
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLDVGGNR-QSLNGQWR 55
>UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forsetii
KT0803|Rep: Beta-galactosidase - Gramella forsetii
(strain KT0803)
Length = 1049
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 DWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRTCNGEWQ 236
DWENP VT +N+L A S+ N + A S ++++ NG WQ
Sbjct: 26 DWENPAVTGINKLPARATMYSFSNKQAAINLNKENSDRVKSLNGTWQ 72
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 99 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDR--PSQQLRTCNGEWQ 236
R+WEN +TQ+NR H P+ ++ + E+A + S+ +++ +G W+
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQAMSCNRWTSKYVKSLSGIWK 50
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.9 bits (84), Expect = 0.24
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +1
Query: 10 RYRXTSXGARYPIRPIVSRIT 72
RYR GARYPIRPIVSRIT
Sbjct: 255 RYRRPRGGARYPIRPIVSRIT 275
>UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1046
Score = 37.1 bits (82), Expect = 0.42
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 93 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRTCNGEWQIV 242
Q +WENP + N+ H F + +E+A D+P S + NG W+ +
Sbjct: 26 QNNEWENPAKYEWNKERPHADFRLYEQAEDAVNDKPRKSSWQHSLNGVWKFI 77
>UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8;
Bacteroidales|Rep: Beta-galactosidase - Bacteroides
thetaiotaomicron
Length = 1036
Score = 35.9 bits (79), Expect = 0.98
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 DWENPGVTQLNRLAAHPPFASWRNSEEAR--TDRPSQQLRTCNGEWQ 236
+W++P V +NR A H + ++ +++EA+ + SQ T NG W+
Sbjct: 26 EWKDPEVNSVNRSAMHTNYFAYASADEAKAGSKEDSQNFMTLNGLWK 72
>UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 1049
Score = 35.9 bits (79), Expect = 0.98
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 93 QRRDWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRTCNGEWQ 236
Q DWENP V +NR A F + + A R ++PS +++ NG W+
Sbjct: 21 QTPDWENPRVFGINREAPRATFTPFPDEASALKRREQPSVFMQSLNGMWK 70
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 0.98
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 87 VLQRRDWENPGVTQLNRLAAHPP 155
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: Beta-galactosidase
precursor - Flavobacterium johnsoniae UW101
Length = 1108
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 WENPGVTQLNRLAAHPPFASWRNSEEA-RTDRPSQQLRTCNGEWQI-VSVNI 254
WE+P +T +NR + S+ + E+A + DR +++ NG+W +VN+
Sbjct: 57 WEDPTITSINRQPSRATAYSYSSVEDALKGDRTKSRIQMLNGDWDFKYAVNL 108
>UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Pseudoalteromonas atlantica T6c|Rep: Glycoside
hydrolase family 2, TIM barrel - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 1045
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 DWENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRTCNGEW 233
DW+NP V +N+ A F + + + D P SQ + NGEW
Sbjct: 11 DWQNPEVFAINKEPARSSFYGFSDDPQGYVDSPFMSQDYLSLNGEW 56
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 81 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGEWQ 236
A L+RR+ +NPG QLN L A P F +++A +R S+ G+ Q
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSKNWPPPEGQRQ 108
>UniRef50_Q84CN9 Cluster: 3-phytase; n=4; Enterobacteriaceae|Rep:
3-phytase - Klebsiella pneumoniae
Length = 421
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 102 DWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRTCNGE 230
DW+ V +L+R PP A R + EA T RP + T +GE
Sbjct: 29 DWQLEKVVELSRHGIRPPTAGNREAIEAATGRPWTEWTTHDGE 71
>UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae
bacterium TAV2|Rep: Beta-galactosidase - Opitutaceae
bacterium TAV2
Length = 1130
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 105 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR--TCNGEWQ 236
WE P +T LN+L F + + +EAR + + R + NG WQ
Sbjct: 10 WEAPELTSLNKLPPRATFHGFGSVKEARAGKSEKSTRHHSLNGTWQ 55
>UniRef50_Q1QJ70 Cluster: Uroporphyrinogen III synthase HEM4; n=1;
Nitrobacter hamburgensis X14|Rep: Uroporphyrinogen III
synthase HEM4 - Nitrobacter hamburgensis (strain X14 /
DSM 10229)
Length = 269
Score = 32.7 bits (71), Expect = 9.1
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -2
Query: 221 AGAQLLGRAIGAGLFAITPAGERGMCCKAIKLGNARVFPVT 99
AGA L GR IGA L+ P G A++ A+VFPVT
Sbjct: 129 AGADLSGRLIGAQLY---PGGGAEKMVSALRRQGAKVFPVT 166
>UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 531
Score = 32.7 bits (71), Expect = 9.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 100 VTGKTLALPNLIALQHIPLSPAGVIAKRPAPIAL 201
V+G L LP+L+ PL P G++A++ PIAL
Sbjct: 64 VSGPNLQLPHLVDELATPLPPTGLLARKMDPIAL 97
>UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiella
blandensis MED217|Rep: Beta-galactosidase -
Leeuwenhoekiella blandensis MED217
Length = 1033
Score = 32.7 bits (71), Expect = 9.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 93 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ--LRTCNGEWQ 236
Q+ +WENP + N+ F + +++A+T SQ ++ NG W+
Sbjct: 20 QQNEWENPKIIDRNKEEGRASFVLFEKTQKAKTRDASQSQFYKSLNGVWK 69
>UniRef50_A0X534 Cluster: Phage integrase family protein; n=1;
Shewanella pealeana ATCC 700345|Rep: Phage integrase
family protein - Shewanella pealeana ATCC 700345
Length = 459
Score = 32.7 bits (71), Expect = 9.1
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -1
Query: 639 NVTATLAQALAPDPFAFFPSFH---ATFA-AFPRQALNRGLPLGFRIYALRHL 493
N+T+ A+ L F+ SFH +TFA + R L + LPLGF Y L L
Sbjct: 355 NITSNAAKELLTSKIEFYRSFHDLRSTFATSLARFLLEKDLPLGFIQYRLMTL 407
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,714,729
Number of Sequences: 1657284
Number of extensions: 16267404
Number of successful extensions: 41732
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 40232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41720
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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