Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0777
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1D3E9 Cluster: PREDICTED: similar to Sperm asso...    33   7.2  

>UniRef50_UPI0000F1D3E9 Cluster: PREDICTED: similar to Sperm
           associated antigen 5; n=1; Danio rerio|Rep: PREDICTED:
           similar to Sperm associated antigen 5 - Danio rerio
          Length = 963

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 298 IPIQCLPTSKLKLYKRSTRRNSY*SCTER-QGRTGCRIGNTQIECSEPFDDDSSESTASH 122
           + ++CL   K K +++S++  S  +C  + +     ++ N+  +  +P DD+SS  TA H
Sbjct: 400 VSVRCLEMKKSKTHEQSSQHLSASNCENKTESSDVSKLNNSDDKPKKPKDDESSVMTAKH 459


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,750,688
Number of Sequences: 1657284
Number of extensions: 13268892
Number of successful extensions: 30170
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 28932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30153
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)