Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0777
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 238 NSY*SCTE-RQGRTGCRIGNTQIECSEPFDDDSSES 134
           N+Y    E R   T  + G +QI   EP D+D ++S
Sbjct: 20  NNYQQVMEPRSPHTAWQFGVSQIVKREPMDEDKNDS 55


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -1

Query: 338 IGHIASRHSELLADSNPVLTNEQAEALQTKHTP 240
           +GHI   HS  +   N     E   ALQ K  P
Sbjct: 230 VGHIEVNHSAPITTCNKKQHLESPSALQAKVDP 262


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 215 TSRKNRM*NWKYPNRVFRTL 156
           T+RKNR+  W+ P  + R +
Sbjct: 82  TNRKNRVLQWREPEELRRLM 101


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 641 FVSSDASVLESRRRVPIFP 697
           F   DAS+  S  RVPI+P
Sbjct: 312 FFVYDASITASLGRVPIWP 330


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 641 FVSSDASVLESRRRVPIFP 697
           F   DAS+  S  RVPI+P
Sbjct: 319 FFVYDASITASLGRVPIWP 337


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 YFQFYIRFFLDV 216
           YFQFY  +FL V
Sbjct: 153 YFQFYYTYFLCV 164


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 131 RLAPLRRNRIAEEIHAVRFSVYATNFKIISNGNV 30
           +L+P  +    EEI   RF  + TNF    + NV
Sbjct: 434 KLSPELKTGSLEEISVKRFVKFWTNFARNGSPNV 467


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 131 RLAPLRRNRIAEEIHAVRFSVYATNFKIISNGNV 30
           +L+P  +    EEI   RF  + TNF    + NV
Sbjct: 436 KLSPELKTGSLEEISVKRFVKFWTNFARNGSPNV 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,304
Number of Sequences: 336
Number of extensions: 3649
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)