Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0777
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.2  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         24   5.5  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         24   5.5  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         24   5.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.3  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 410 LRAASLKLSI--KVIEHAVDICMTHVNHNKY 496
           L +  +KLSI   V+     +CM+ VNHN +
Sbjct: 518 LNSFKMKLSIIFGVVHMIFGVCMSLVNHNHF 548


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 RCSHYCRRQRVRNTRFGY 183
           R  H  RR+R R+ RFGY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 RCSHYCRRQRVRNTRFGY 183
           R  H  RR+R R+ RFGY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 RCSHYCRRQRVRNTRFGY 183
           R  H  RR+R R+ RFGY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 410 LRAASLKLSI--KVIEHAVDICMTHVNHN 490
           L +  +KLSI   V+     +CM+ VNHN
Sbjct: 529 LNSYKMKLSIIFGVVHMIFGVCMSVVNHN 557


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,747
Number of Sequences: 2352
Number of extensions: 14527
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)