Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0776
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.3  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   4.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 342 DDLKKI--TQSAXAQIVHYGMNAKVGNVSFEMPQPGEMVIDKPYSEK 476
           DD + +  T+    + +H  +      +   +PQP E V  KP S K
Sbjct: 362 DDFRGVSGTKYPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTK 408


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 663 VLFSGNGLGPNSPIISSRLKISC 595
           VL     L P+ P+I  RL++ C
Sbjct: 50  VLKEAQRLYPSVPVIERRLEVDC 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,254
Number of Sequences: 336
Number of extensions: 3080
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)