Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0776
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 144 3e-34
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 144 3e-34
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 142 1e-33
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 85 2e-16
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 85 2e-16
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 85 2e-16
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 85 2e-16
AK127143-1|BAC86848.1| 189|Homo sapiens protein ( Homo sapiens ... 72 2e-12
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 54 4e-07
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 54 4e-07
AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein. 54 4e-07
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 54 4e-07
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 54 4e-07
D63880-1|BAA09930.2| 1406|Homo sapiens KIAA0159 protein. 32 1.7
BC028182-1|AAH28182.1| 1401|Homo sapiens non-SMC condensin I com... 32 1.7
AK125155-1|BAC86066.1| 939|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK128548-1|BAC87495.1| 131|Homo sapiens protein ( Homo sapiens ... 30 6.7
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 144 bits (348), Expect = 3e-34
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQL DRMCMTLGGRVSEEIFFGRITTGAQDDL+K+TQSA AQIV +GMN KVG +SF++
Sbjct: 618 KEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL 677
Query: 432 PQPGEMVIDKPYSEKTAELIDSEVR 506
P+ G+MV++KPYSE TA LID EVR
Sbjct: 678 PRQGDMVLEKPYSEATARLIDDEVR 702
Score = 137 bits (332), Expect = 3e-32
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +1
Query: 1 RILANDITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLK 180
R L++ I K+FEQAIER + G+EKK+ VLQP+E+ VAYH G AVAGW+L+HADPLLK
Sbjct: 534 RHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLK 593
Query: 181 VSIIPRGKGLGYAQYLPKXQYLYSKNNYL 267
VSIIPRGKGLGYAQYLPK QYLY+K L
Sbjct: 594 VSIIPRGKGLGYAQYLPKEQYLYTKEQLL 622
Score = 63.7 bits (148), Expect = 6e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 509 LINNAXXXXXXXXXXXXPNIEKVAERLLKQEILSRDDMIGLLGPRPFPEKSTYEEFGEG 685
LIN+A ++EKVA LL++E+L ++DM+ LLGPRPF EKSTYEEF EG
Sbjct: 704 LINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEG 762
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 144 bits (348), Expect = 3e-34
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQL DRMCMTLGGRVSEEIFFGRITTGAQDDL+K+TQSA AQIV +GMN KVG +SF++
Sbjct: 633 KEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL 692
Query: 432 PQPGEMVIDKPYSEKTAELIDSEVR 506
P+ G+MV++KPYSE TA LID EVR
Sbjct: 693 PRQGDMVLEKPYSEATARLIDDEVR 717
Score = 137 bits (332), Expect = 3e-32
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +1
Query: 1 RILANDITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLK 180
R L++ I K+FEQAIER + G+EKK+ VLQP+E+ VAYH G AVAGW+L+HADPLLK
Sbjct: 549 RHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLK 608
Query: 181 VSIIPRGKGLGYAQYLPKXQYLYSKNNYL 267
VSIIPRGKGLGYAQYLPK QYLY+K L
Sbjct: 609 VSIIPRGKGLGYAQYLPKEQYLYTKEQLL 637
Score = 63.7 bits (148), Expect = 6e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 509 LINNAXXXXXXXXXXXXPNIEKVAERLLKQEILSRDDMIGLLGPRPFPEKSTYEEFGEG 685
LIN+A ++EKVA LL++E+L ++DM+ LLGPRPF EKSTYEEF EG
Sbjct: 719 LINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEG 777
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 142 bits (344), Expect = 1e-33
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQL DRMCMTLGGR SEEIFFGRITTGAQDDL+K+TQSA AQIV +GMN KVG +SF++
Sbjct: 618 KEQLLDRMCMTLGGRASEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL 677
Query: 432 PQPGEMVIDKPYSEKTAELIDSEVR 506
P+ G+MV++KPYSE TA LID EVR
Sbjct: 678 PRQGDMVLEKPYSEATARLIDDEVR 702
Score = 137 bits (332), Expect = 3e-32
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +1
Query: 1 RILANDITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLK 180
R L++ I K+FEQAIER + G+EKK+ VLQP+E+ VAYH G AVAGW+L+HADPLLK
Sbjct: 534 RHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLK 593
Query: 181 VSIIPRGKGLGYAQYLPKXQYLYSKNNYL 267
VSIIPRGKGLGYAQYLPK QYLY+K L
Sbjct: 594 VSIIPRGKGLGYAQYLPKEQYLYTKEQLL 622
Score = 63.7 bits (148), Expect = 6e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 509 LINNAXXXXXXXXXXXXPNIEKVAERLLKQEILSRDDMIGLLGPRPFPEKSTYEEFGEG 685
LIN+A ++EKVA LL++E+L ++DM+ LLGPRPF EKSTYEEF EG
Sbjct: 704 LINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEG 762
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 85.4 bits (202), Expect = 2e-16
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 NFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR-GKG 207
NFE A+ER +AG KKS +L +E+ +VA+H G A+ GW L+H + ++KVSI PR
Sbjct: 544 NFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAA 603
Query: 208 LGYAQYLPKXQYLYSK 255
LG+AQ LP+ Q+L++K
Sbjct: 604 LGFAQMLPRDQHLFTK 619
Score = 85.0 bits (201), Expect = 2e-16
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQLF+RMCM LGGR SE + F +T+GAQDDL+K+T+ A + + +GM +G +SF
Sbjct: 619 KEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPE 678
Query: 432 PQPGEMVID-KPYSEKTAELIDSEVR 506
Q G M I +P+S+ +++D E R
Sbjct: 679 AQEGLMGIGRRPFSQGLQQMMDHEAR 704
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 85.4 bits (202), Expect = 2e-16
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 NFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR-GKG 207
NFE A+ER +AG KKS +L +E+ +VA+H G A+ GW L+H + ++KVSI PR
Sbjct: 544 NFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAA 603
Query: 208 LGYAQYLPKXQYLYSK 255
LG+AQ LP+ Q+L++K
Sbjct: 604 LGFAQMLPRDQHLFTK 619
Score = 85.0 bits (201), Expect = 2e-16
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQLF+RMCM LGGR SE + F +T+GAQDDL+K+T+ A + + +GM +G +SF
Sbjct: 619 KEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPE 678
Query: 432 PQPGEMVID-KPYSEKTAELIDSEVR 506
Q G M I +P+S+ +++D E R
Sbjct: 679 AQEGLMGIGRRPFSQGLQQMMDHEAR 704
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 85.4 bits (202), Expect = 2e-16
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 NFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR-GKG 207
NFE A+ER +AG KKS +L +E+ +VA+H G A+ GW L+H + ++KVSI PR
Sbjct: 481 NFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAA 540
Query: 208 LGYAQYLPKXQYLYSK 255
LG+AQ LP+ Q+L++K
Sbjct: 541 LGFAQMLPRDQHLFTK 556
Score = 85.0 bits (201), Expect = 2e-16
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQLF+RMCM LGGR SE + F +T+GAQDDL+K+T+ A + + +GM +G +SF
Sbjct: 556 KEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPE 615
Query: 432 PQPGEMVID-KPYSEKTAELIDSEVR 506
Q G M I +P+S+ +++D E R
Sbjct: 616 AQEGLMGIGRRPFSQGLQQMMDHEAR 641
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 85.4 bits (202), Expect = 2e-16
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 NFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR-GKG 207
NFE A+ER +AG KKS +L +E+ +VA+H G A+ GW L+H + ++KVSI PR
Sbjct: 544 NFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAA 603
Query: 208 LGYAQYLPKXQYLYSK 255
LG+AQ LP+ Q+L++K
Sbjct: 604 LGFAQMLPRDQHLFTK 619
Score = 85.0 bits (201), Expect = 2e-16
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEM 431
+EQLF+RMCM LGGR SE + F +T+GAQDDL+K+T+ A + + +GM +G +SF
Sbjct: 619 KEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPE 678
Query: 432 PQPGEMVID-KPYSEKTAELIDSEVR 506
Q G M I +P+S+ +++D E R
Sbjct: 679 AQEGLMGIGRRPFSQGLQQMMDHEAR 704
>AK127143-1|BAC86848.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ45200 fis, clone BRCAN2006051, moderately
similar to AFG3-like protein 2 (EC 3.4.24.-). ).
Length = 189
Score = 71.7 bits (168), Expect = 2e-12
Identities = 30/58 (51%), Positives = 46/58 (79%)
Frame = +3
Query: 333 GAQDDLKKITQSAXAQIVHYGMNAKVGNVSFEMPQPGEMVIDKPYSEKTAELIDSEVR 506
GAQDDL+K+TQSA AQ+V +G++ K+G VSF+ + G+ +++K Y E +A+L+D EVR
Sbjct: 2 GAQDDLRKVTQSAYAQVVQFGVSEKLGQVSFDFSRHGKTLVEKLYGEASAQLLDDEVR 59
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +2
Query: 563 NIEKVAERLLKQEILSRDDMIGLLGPRPFPEKSTYEEFGEG 685
++EKV +RLL++E+L + DM+ LLGPRPF KSTYEEF EG
Sbjct: 79 HVEKVGQRLLEKEVLEKADMVELLGPRPFSAKSTYEEFVEG 119
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 565 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 624
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 625 GPTLGHVSLLPE 636
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 646 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 703
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 565 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 624
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 625 GPTLGHVSLLPE 636
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 646 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 703
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 565 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 624
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 625 GPTLGHVSLLPE 636
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 646 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 703
>AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein.
Length = 517
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 311 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 370
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 371 GPTLGHVSLLPE 382
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 392 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 449
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 508 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 567
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 568 GPTLGHVSLLPE 579
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 589 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 646
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 19 ITMKNFEQAIERXVAGMEKKSNVLQPDERXIVAYHXXGXAVAGWFLQHADPLLKVSIIPR 198
+TMK E + ++ + G E++S + + I AYH G A+ ++ + A P+ K +I+PR
Sbjct: 565 VTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR 624
Query: 199 GKGLGYAQYLPK 234
G LG+ LP+
Sbjct: 625 GPTLGHVSLLPE 636
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 258 QLFDRMCMTLGGRVSEEIFFG--RITTGAQDDLKKITQSAXAQIVHYGMNAKVGNVSF 425
QL +M +++GGRV+EE+ FG ITTGA D T+ A + +GM+ K+G +++
Sbjct: 646 QLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 703
>D63880-1|BAA09930.2| 1406|Homo sapiens KIAA0159 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -1
Query: 438 AVASRKTHFRL*RSYHSVQSAXKRFVLSFLSHPEPLWLFFRRISLHLLYPL 286
++ R FRL + + + + F+ HP+PLW+ F+ +++ L+Y L
Sbjct: 834 SLGKRHPPFRLPQEHRLFERLRETVTKGFV-HPDPLWIPFKEVAVTLIYQL 883
>BC028182-1|AAH28182.1| 1401|Homo sapiens non-SMC condensin I
complex, subunit D2 protein.
Length = 1401
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -1
Query: 438 AVASRKTHFRL*RSYHSVQSAXKRFVLSFLSHPEPLWLFFRRISLHLLYPL 286
++ R FRL + + + + F+ HP+PLW+ F+ +++ L+Y L
Sbjct: 829 SLGKRHPPFRLPQEHRLFERLRETVTKGFV-HPDPLWIPFKEVAVTLIYQL 878
>AK125155-1|BAC86066.1| 939|Homo sapiens protein ( Homo sapiens
cDNA FLJ43165 fis, clone FCBBF3002163, highly similar
to Homo sapiens chromosome condensation-related
SMC-associated protein 1. ).
Length = 939
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -1
Query: 438 AVASRKTHFRL*RSYHSVQSAXKRFVLSFLSHPEPLWLFFRRISLHLLYPL 286
++ R FRL + + + + F+ HP+PLW+ F+ +++ L+Y L
Sbjct: 701 SLGKRHPPFRLPQEHRLFERLRETVTKGFV-HPDPLWIPFKEVAVTLIYQL 750
>AK128548-1|BAC87495.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ46707 fis, clone TRACH3015467. ).
Length = 131
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 328 VILPKNISSLTLPPSVMHILSNSCSCCINT 239
+++P ++ L L S +L NSCSCCI T
Sbjct: 61 LLVPPHLQLLPLLKSWNELLPNSCSCCILT 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,224,019
Number of Sequences: 237096
Number of extensions: 1738243
Number of successful extensions: 6277
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6260
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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