BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0776 (687 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 26 0.29 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 25 0.68 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.7 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.3 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.3 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 26.2 bits (55), Expect = 0.29 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -2 Query: 464 WFVNHHFTGLWHLERHISDFSVHTIVYNLRXSALCYLF*VILSPCGYSSEEYLFTY 297 W++NH + L I D ++T + LR + +L Y EEYL+++ Sbjct: 208 WYLNHDYNLENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSH 263 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 25.0 bits (52), Expect = 0.68 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -2 Query: 464 WFVNHHFTGLWHLERHISDFSVHTIVYNLRXSALCYLF*VILSPCGYSSEEYLFTY 297 W++NH + L I D ++T + LR + +L Y EEYL+++ Sbjct: 208 WYLNHDYNLENKLIYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSH 263 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 23.0 bits (47), Expect = 2.7 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +3 Query: 315 FGRIT-TGAQDDLKKITQSAXAQIVHYGMN 401 FG T GAQ DLK + Q A + +V G++ Sbjct: 176 FGSWTYNGAQVDLKHMKQEAGSNLVAKGID 205 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.8 bits (44), Expect = 6.3 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +2 Query: 65 VWRKNLMFSNQTRGRL*RIMXXAMQLQV 148 VW +L FSN+ G I+ + +++ Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRI 142 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.8 bits (44), Expect = 6.3 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +2 Query: 65 VWRKNLMFSNQTRGRL*RIMXXAMQLQV 148 VW +L FSN+ G I+ + +++ Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRI 142 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 183,458 Number of Sequences: 438 Number of extensions: 3419 Number of successful extensions: 10 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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