Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0775
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical
           protein C08B6.10 protein.
          Length = 140

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 99  SPVLVPEARRIPSGQQQSRAKHIEHKKSQTKATENNW 209
           +PV     RR P+  Q + A  I+  + Q ++ +NNW
Sbjct: 37  NPVTAAPIRRQPTVIQTTWAPQIQQPQQQLESPQNNW 73


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 93  RISPVLVPEARRIPSGQQQSRAKHIEHKKSQTKATENN 206
           R SPV    A R PS Q    ++H EH+    ++  +N
Sbjct: 667 RSSPVASEPAARSPSVQSSRTSEHFEHRGEVPQSPSSN 704


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,838,901
Number of Sequences: 27780
Number of extensions: 220500
Number of successful extensions: 434
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)