BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0774 (704 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0589 + 19022233-19022457,19022578-19022709,19023129-190232... 33 0.22 08_02_0801 + 21349434-21349438,21349952-21349978,21351175-213512... 33 0.22 03_06_0354 - 33333634-33333840,33334106-33334213,33335384-333355... 32 0.51 01_04_0046 - 15400890-15403097 30 1.6 07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516... 30 2.1 09_04_0225 - 15855544-15855727,15855796-15856406 29 2.7 04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 29 2.7 07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 28 6.3 >10_08_0589 + 19022233-19022457,19022578-19022709,19023129-19023227, 19023384-19023431,19023926-19023976,19024205-19024273, 19024337-19024419,19024643-19024766,19024843-19024902, 19024983-19025225,19025426-19025509,19025581-19025728, 19025909-19025986,19025987-19026114,19026204-19026251, 19026922-19027052,19027708-19027817,19028365-19028468, 19028614-19028684,19029091-19029389,19029507-19029682 Length = 836 Score = 33.1 bits (72), Expect = 0.22 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +2 Query: 527 NNTIKTVMSFRWIFQH-CAEAQHYLFTDDDMYISVQTLLKYVSDVTTAKRKRR 682 N I + +F+ +QH EAQ+Y+ +++ +++ K + D T+A+RKR+ Sbjct: 654 NALIMDMENFKQQYQHHLQEAQYYVMQSKELHNNLEVAQKNIIDHTSAQRKRK 706 >08_02_0801 + 21349434-21349438,21349952-21349978,21351175-21351249, 21351333-21351369,21351469-21351552,21351821-21351881, 21351961-21352067,21352162-21352227,21352366-21352461 Length = 185 Score = 33.1 bits (72), Expect = 0.22 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -3 Query: 219 YCL--DYRSNVYVERIIEIAIEVLGLHVIADTEKMVNIXKHQSEY 91 YCL D + + + E+ VLGL +K+VN KHQSEY Sbjct: 93 YCLTEDKKKCIEIPVACELLNLVLGLQFRPQVDKLVNYLKHQSEY 137 >03_06_0354 - 33333634-33333840,33334106-33334213,33335384-33335557, 33335637-33335765,33335858-33336145,33336257-33336489, 33336607-33337435 Length = 655 Score = 31.9 bits (69), Expect = 0.51 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +3 Query: 312 DLVIIVKSAIDHFGHRDAIXKTYGKPHVQGYNVKTFFFLGVDNASSDVQKNITKEMTEFK 491 ++ I + SA +HF R A+ KT+ + NV FF+ + N+ +V + KE F Sbjct: 410 EIFIGILSAGNHFAERMAVRKTWMSAAQKSSNVVARFFVAL-NSRKEVNAELKKEAEFFG 468 Query: 492 XII 500 I+ Sbjct: 469 DIV 471 >01_04_0046 - 15400890-15403097 Length = 735 Score = 30.3 bits (65), Expect = 1.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +3 Query: 351 GHRDAIXKTYGKPHVQGYNVKTFFFLGVDNASSDV 455 G D+ + + H G+ F F+GV NASSD+ Sbjct: 300 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDL 334 >07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390, 5162515-5162643,5162722-5163009,5163114-5163346, 5164235-5165060 Length = 655 Score = 29.9 bits (64), Expect = 2.1 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +3 Query: 312 DLVIIVKSAIDHFGHRDAIXKTYGKPHVQGYNVKTFFFLGVDNASSDVQKNITKEMTEFK 491 +L I + SA HF R A+ K++ + N+ FF+ + N +V + +E F+ Sbjct: 409 ELFIGILSAASHFAERMAVRKSWMMYTRKSTNIVARFFVAL-NGKKEVNAELKREAEFFQ 467 Query: 492 XII 500 I+ Sbjct: 468 DIV 470 >09_04_0225 - 15855544-15855727,15855796-15856406 Length = 264 Score = 29.5 bits (63), Expect = 2.7 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 Query: 323 NSQVGYRPFRTQRCNXKDLWKTTCPGLQR 409 ++ G P T RC W T+CPG R Sbjct: 167 STSAGATPSATTRCRSCTAWATSCPGTSR 195 >04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500, 32208604-32208814,32208927-32209108,32209196-32209297, 32210002-32211187,32212103-32212499,32212551-32212582, 32212885-32213157,32213307-32213394,32213486-32213723, 32213824-32214034,32214119-32214300,32214378-32214479, 32214801-32216224,32216751-32216822,32217688-32217719, 32218186-32218263,32218425-32218512,32218608-32218845, 32219060-32219162,32219386-32219558,32219644-32219745, 32219825-32220606,32220659-32221012,32224055-32224140, 32224250-32224400,32224534-32224771,32224876-32225119, 32225190-32225368,32225577-32225675,32225835-32227083 Length = 3195 Score = 29.5 bits (63), Expect = 2.7 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +2 Query: 311 GFSHNSQVGYRPFRTQRCNXKDLWKTTCPGLQREDILLFGRGQCQFRCTEE 463 GFS NS G R RC +D + T PG++ D L+ R + C +E Sbjct: 1022 GFSLNSSRGCRRKEELRCGGQDHF-FTLPGMKVPDKFLYIRNRTFEECADE 1071 >07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412, 1778770-1778900,1779530-1779788,1779823-1780098, 1780100-1781352 Length = 1344 Score = 28.3 bits (60), Expect = 6.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = +2 Query: 323 NSQVGYRPFRTQRCNXKDLWKTTCPGLQREDILLFGRGQCQF---RCTEE 463 N+ GYRP Q C+ K L K LQR + + Q F RC E Sbjct: 983 NTVDGYRPISLQNCSVKILSKVLATRLQRVFLRMIHLDQTGFLKGRCISE 1032 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,184,898 Number of Sequences: 37544 Number of extensions: 297120 Number of successful extensions: 632 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 632 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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