Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0773
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.0  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 176 ANICIICSLCYFKISNQRILCDSMQTHLLER--VAIYFSSY-LLFCVG 310
           +N  I C + Y +I   RI+C +  +H L R  V +  ++Y   +C G
Sbjct: 56  SNRDITCQIAYRRIEGDRIVC-AAYSHELPRYGVKVGLTNYAAAYCTG 102


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = +1

Query: 502 FEYPIVQSITCCVYANVERRLSGTVTSYSATYPLVSKWXIMGRAFIPTNWICYVHAHSRP 681
           F + +V+  T  + A +      +V+S S    L S W ++   +   +W+   H+   P
Sbjct: 505 FNFLMVRRGTVPLPARITALHLASVSSRSQLMKLPSSWDLLPYFWFAFHWLAMSHSCYNP 564

Query: 682 L 684
           +
Sbjct: 565 I 565


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 164  YLNQANICIICSLCYFKI 217
            YLN   ICI  S C  KI
Sbjct: 1657 YLNMIFICIFSSECLMKI 1674


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,280
Number of Sequences: 2352
Number of extensions: 14153
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)