Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0773
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.52 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.69 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.1  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   4.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 499 SFEYPIVQSITCCVYANVERRL 564
           +F YPI+  + C VYA + R++
Sbjct: 819 AFAYPIMLIVVCTVYAVLTRKI 840


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 1   RHEKQRTDHLKRXTXKRIENFEMFVKCFKCS 93
           +  K+  D +K     RI++++  +KC KCS
Sbjct: 124 KRRKKSLDDVKILRNDRIDSYKSNLKCDKCS 154


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +1

Query: 196 FFVLFQNIKSEDPVRLYANSPPRAGSDLLLLLFTIL 303
           FF+ +    ++  + +YA +      D+L++++TIL
Sbjct: 294 FFICWAPFHAQRLLAVYAQNSKDKPEDVLIIIYTIL 329


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 76  KCFKCSKCYYS 108
           K FKC KC YS
Sbjct: 15  KPFKCEKCSYS 25


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 121 PGRIFIYPEPQRVTIS*SSQYLHNLFFVLF 210
           PG  F YP+ ++V +  + Q +  LF  L+
Sbjct: 651 PGTRFFYPDRKQVILKCNIQDMSFLFSQLY 680


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 128 EFLFIPNPSA*QYLNQANICIICSLCYFKISNQRILCDSMQTHLLERV 271
           E L  P  S  Q+LN A     C + +    N+R + ++   H   R+
Sbjct: 551 ELLQNPKVSNEQFLNTAATLSFCEMIHNAQVNKRSIHNNYPVHTFGRL 598


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 121 PGRIFIYPEPQRVTIS*SSQYLHNLFFVLF 210
           PG  F YP+ ++V +  + Q +  LF  L+
Sbjct: 741 PGTRFFYPDRKQVILKCNIQDMSFLFSQLY 770


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 631 AFIPTNWICYVHAHSRPL 684
           AFI T+W+ Y+++   P+
Sbjct: 658 AFIVTSWLGYMNSFVNPV 675


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,841
Number of Sequences: 438
Number of extensions: 4291
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)