Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0772
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021352-1|AAX33500.1|  948|Drosophila melanogaster LP18549p pro...    29   4.7  
AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA...    29   4.7  

>BT021352-1|AAX33500.1|  948|Drosophila melanogaster LP18549p
           protein.
          Length = 948

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 33  WQSNIVFKRKTKRISSLIKV-INKITWVGSGLALPLALLK 149
           W+  +  KRK K+  SL+K  +N   W  +GL L L +L+
Sbjct: 65  WEKEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVLFILE 104


>AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA
           protein.
          Length = 1362

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 33  WQSNIVFKRKTKRISSLIKV-INKITWVGSGLALPLALLK 149
           W+  +  KRK K+  SL+K  +N   W  +GL L L +L+
Sbjct: 65  WEKEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVLFILE 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,828,471
Number of Sequences: 53049
Number of extensions: 545854
Number of successful extensions: 1069
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)