Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0772
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88175-3|AAB42280.1|  295|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z80221-1|CAB02309.1|  690|Caenorhabditis elegans Hypothetical pr...    29   4.3  

>U88175-3|AAB42280.1|  295|Caenorhabditis elegans Hypothetical
           protein F21F3.3 protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 292 HSRELTKYFQHYCRL*NEYKLYFFLFIALVGRRAYGP 182
           H  EL +YF  Y    + +    F+F AL  RR  GP
Sbjct: 98  HEGELWEYFSRYFLFLSVFHFSEFVFTALTNRRTLGP 134


>Z80221-1|CAB02309.1|  690|Caenorhabditis elegans Hypothetical
           protein ZC247.2 protein.
          Length = 690

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 551 AQTGNVANTGPSKSSASQNLSSDRKRDPLRRSGEKLQWVVS 673
           A  GN ++ G  +S +  +++ DR+ DP+   G K +  ++
Sbjct: 326 ALNGNASSRGLGRSISRSSMTPDRRLDPILEDGSKQRQAIA 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,007,360
Number of Sequences: 27780
Number of extensions: 287167
Number of successful extensions: 590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)