Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0770
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q83ED7 Cluster: Putative uncharacterized protein; n=9; ...    38   0.24 
UniRef50_Q8I422 Cluster: Putative uncharacterized protein PFE040...    33   6.9  
UniRef50_UPI00006A1B9D Cluster: UPI00006A1B9D related cluster; n...    33   9.2  
UniRef50_A2ZRG0 Cluster: Putative uncharacterized protein; n=3; ...    33   9.2  

>UniRef50_Q83ED7 Cluster: Putative uncharacterized protein; n=9;
           Coxiella burnetii|Rep: Putative uncharacterized protein
           - Coxiella burnetii
          Length = 1392

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -2

Query: 209 KHITSFFILSVD-FSRNDEFGAFFYKFSNIFSND-CLTKNNKYITTFPQTDLLFVPNVNI 36
           K+ITS+F+   D      +F   F + SN   ND CL + N      P T LL  P VNI
Sbjct: 558 KNITSYFLERCDSIETYRKFSEIFNELSNQHGNDYCLDECNLEDGRIPLTVLLSRPTVNI 617

Query: 35  AIISVYIS 12
            ++  YI+
Sbjct: 618 PLLKYYIN 625


>UniRef50_Q8I422 Cluster: Putative uncharacterized protein PFE0400w;
            n=3; Plasmodium|Rep: Putative uncharacterized protein
            PFE0400w - Plasmodium falciparum (isolate 3D7)
          Length = 1674

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 374  YAIENVKKLTLSKRVASFNMNYTHTK*RHNKTNILHSQSAH 496
            Y I+  KK TLSKR+ SF       K +    NI H++S H
Sbjct: 1073 YKIKYNKKWTLSKRIQSFQKKKKKKKKKKKIKNITHNESKH 1113


>UniRef50_UPI00006A1B9D Cluster: UPI00006A1B9D related cluster; n=2;
           Xenopus tropicalis|Rep: UPI00006A1B9D UniRef100 entry -
           Xenopus tropicalis
          Length = 788

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -2

Query: 215 ETKHITSFFILSVDFSRNDEFGAFFYKFSNIFSNDCLTKN--NKYITTFPQTDLLFVPNV 42
           +T  I    +LSVDF  +D       K  N+F    + K+  N  I TF QT   F    
Sbjct: 281 QTSSIQDLSLLSVDFDYSDVRTTVDVKMDNLFLRSLVIKDATNPDILTFDQTFTWFSKVS 340

Query: 41  NIAIISV 21
           N+ II+V
Sbjct: 341 NLYIINV 347


>UniRef50_A2ZRG0 Cluster: Putative uncharacterized protein; n=3; Oryza
            sativa|Rep: Putative uncharacterized protein - Oryza
            sativa subsp. japonica (Rice)
          Length = 1393

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 563  NFFHLTPVFTRATVSRVFNFYFGHLRQPSLGGTKFCFA 676
            ++  ++ +   ATVSR F F  G L   ++   K CFA
Sbjct: 1139 DYVKVSDILNEATVSRCFEFLLGDLSNANVSNVKLCFA 1176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,364,742
Number of Sequences: 1657284
Number of extensions: 13756488
Number of successful extensions: 27993
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27981
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)