Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0769
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071721-1|AAL49343.1|  152|Drosophila melanogaster RH37427p pro...   136   4e-32
AE014297-2020|AAF55178.1|  152|Drosophila melanogaster CG6196-PA...   136   4e-32
AY119058-1|AAM50918.1|  480|Drosophila melanogaster LP07257p pro...    29   6.0  
AE014298-2823|AAF48940.1|  480|Drosophila melanogaster CG7992-PA...    29   6.0  

>AY071721-1|AAL49343.1|  152|Drosophila melanogaster RH37427p
           protein.
          Length = 152

 Score =  136 bits (328), Expect = 4e-32
 Identities = 59/86 (68%), Positives = 73/86 (84%)
 Frame = +2

Query: 251 KITREWPRFKDELDTMKFICTDFWTCIYKKQIDNLRTNHQGVYVLQDNAFRFLTNFSNGH 430
           ++TRE  RFKDEL+TMKFICTDFW  IYKKQ+DNLRTN+ G+YV+QD AFRFLT  S G 
Sbjct: 44  RLTREVSRFKDELETMKFICTDFWMLIYKKQVDNLRTNNHGMYVVQDKAFRFLTRISPGT 103

Query: 431 QYLEYAPRYVAYTCGLIRGGLANLCI 508
           + LE+AP++VA+TCGL+RG L+NL I
Sbjct: 104 KQLEHAPKFVAFTCGLVRGALSNLGI 129



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = +3

Query: 102 MADDIIFELLHSEIINYSIEKFKNNDNGEKETDLSVVEYIGFAAGYKIMER 254
           M+++I+F+ LH+EI+NY ++         KE DL+ +EYIGF  GY+++ER
Sbjct: 1   MSEEILFDCLHAEIVNYCLDS-------NKEHDLATLEYIGFTTGYRLIER 44



 Score = 37.9 bits (84), Expect = 0.013
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 511 SIVTAEVQSMPSCKFHIHVQR 573
           S VTAEVQS+P+CKFHI V R
Sbjct: 131 STVTAEVQSIPACKFHIEVNR 151


>AE014297-2020|AAF55178.1|  152|Drosophila melanogaster CG6196-PA
           protein.
          Length = 152

 Score =  136 bits (328), Expect = 4e-32
 Identities = 59/86 (68%), Positives = 73/86 (84%)
 Frame = +2

Query: 251 KITREWPRFKDELDTMKFICTDFWTCIYKKQIDNLRTNHQGVYVLQDNAFRFLTNFSNGH 430
           ++TRE  RFKDEL+TMKFICTDFW  IYKKQ+DNLRTN+ G+YV+QD AFRFLT  S G 
Sbjct: 44  RLTREVSRFKDELETMKFICTDFWMLIYKKQVDNLRTNNHGMYVVQDKAFRFLTRISPGT 103

Query: 431 QYLEYAPRYVAYTCGLIRGGLANLCI 508
           + LE+AP++VA+TCGL+RG L+NL I
Sbjct: 104 KQLEHAPKFVAFTCGLVRGALSNLGI 129



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = +3

Query: 102 MADDIIFELLHSEIINYSIEKFKNNDNGEKETDLSVVEYIGFAAGYKIMER 254
           M+++I+F+ LH+EI+NY ++         KE DL+ +EYIGF  GY+++ER
Sbjct: 1   MSEEILFDCLHAEIVNYCLDS-------NKEHDLATLEYIGFTTGYRLIER 44



 Score = 37.9 bits (84), Expect = 0.013
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 511 SIVTAEVQSMPSCKFHIHVQR 573
           S VTAEVQS+P+CKFHI V R
Sbjct: 131 STVTAEVQSIPACKFHIEVNR 151


>AY119058-1|AAM50918.1|  480|Drosophila melanogaster LP07257p
           protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 403 TECII-LKYINSLVVCTKIIYLFFV 332
           TECII + Y+  L+ CT I+Y +FV
Sbjct: 376 TECIICISYVLKLI-CTSIVYFYFV 399


>AE014298-2823|AAF48940.1|  480|Drosophila melanogaster CG7992-PA
           protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 403 TECII-LKYINSLVVCTKIIYLFFV 332
           TECII + Y+  L+ CT I+Y +FV
Sbjct: 376 TECIICISYVLKLI-CTSIVYFYFV 399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,211,902
Number of Sequences: 53049
Number of extensions: 556517
Number of successful extensions: 1160
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)