Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0769
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-5|CAB05547.1|  185|Caenorhabditis elegans Hypothetical pr...   105   3e-23
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    29   3.2  
AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode asta...    29   3.2  
Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z83113-5|CAB05547.1|  185|Caenorhabditis elegans Hypothetical
           protein K08H10.9 protein.
          Length = 185

 Score =  105 bits (252), Expect = 3e-23
 Identities = 44/89 (49%), Positives = 64/89 (71%)
 Frame = +2

Query: 251 KITREWPRFKDELDTMKFICTDFWTCIYKKQIDNLRTNHQGVYVLQDNAFRFLTNFSNGH 430
           K+++E P+   EL+ +KFIC DFW+ ++ KQ+DNLRTNHQGVYV+QD  F  L +F  G 
Sbjct: 77  KVSKESPKLVTELEIVKFICKDFWSSVFGKQVDNLRTNHQGVYVVQDGRFTTLRSFPEGD 136

Query: 431 QYLEYAPRYVAYTCGLIRGGLANLCITVL 517
           QY++ +  ++A+ CGL+RG LA L I  +
Sbjct: 137 QYVKESGYFLAFPCGLLRGALAGLNIRAI 165



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 511 SIVTAEVQSMPSCKFHIHVQ 570
           +IVT  ++S+PS KFHI VQ
Sbjct: 164 AIVTPTIESVPSVKFHIQVQ 183


>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
           protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 87  LDPSRMADDIIFELLHSEIINYSIEKFK 170
           LDPS + D+   EL+HS+I++  +++ K
Sbjct: 465 LDPSELNDEFTEELVHSQIMSNGVDECK 492


>AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode astacin
           protease protein27 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 528 FCCDNTVIQRLANPPRMSPQV*ATYLGAYSRY 433
           FCCD  +  R + P     +     +GAY+RY
Sbjct: 385 FCCDEHIYNRYSQPKVFQSEGPLAVIGAYARY 416


>Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical
           protein F55B12.2 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 383 LQDNAFRFLTNFSNGHQYLEYAPRYVAYTCGLIRGGLANLCITVL 517
           L+DN   F+  + N    L  AP+Y   +CG IR  ++ L I ++
Sbjct: 53  LRDNHLDFIQPYVNIRSDLFIAPKYKILSCG-IRKSMSQLLINIM 96


>Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical
           protein R09A8.2 protein.
          Length = 891

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 81  KYLDPSRMADDIIFELLHSEIINYSIEKFKNNDNGEKETDLSVVEYIGF 227
           K  D  + +DD++ ELL   ++  S  +  NN   + ET+    EY GF
Sbjct: 148 KMADVDKFSDDLVIELLDFFVMIRSDVEMANNKTEKLETN---AEYYGF 193


>AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical
           protein C49A9.7 protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 393 MHSVF*QIFLMVISTWNMLLDMLLTLVGSFEVDWLISVLQYCHSRSSVYAF 545
           +H +  QIF  ++ T    L + L L+G+F V W+I   +   S ++ Y F
Sbjct: 55  VHPIVSQIFYGILFT----LTIFLALMGNFTVMWIILYHRQMRSVTNYYLF 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,561,565
Number of Sequences: 27780
Number of extensions: 310643
Number of successful extensions: 721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)