Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0768
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -3

Query: 253 ITQSNT*ISKNIA*NRIALYKREINFFACNIFLV 152
           +T++++ + +NI    + L  +++ F AC  FL+
Sbjct: 319 VTKTDSMLIRNINLFSLQLAHQKLEFSACGFFLI 352


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -3

Query: 253 ITQSNT*ISKNIA*NRIALYKREINFFACNIFLV 152
           +T++++ + +NI    + L  +++ F AC  FL+
Sbjct: 144 VTKTDSMLIRNINLFSLQLAHQKLEFSACGFFLI 177


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 255 ISPKVIPKLVKILHK 211
           I+PK I ++V+I+HK
Sbjct: 189 ITPKEIERMVQIIHK 203


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 47  QTILQNSNWYKELSSTQKIFVNQHLVPVT 133
           Q +LQ+ N+ +E ++ +    NQ L P+T
Sbjct: 18  QAVLQSYNFLQEKTTYEYYENNQALPPIT 46


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 562 LITSMPVIMVDQTITGTCRLTDPAPVMTF 648
           L  S PV +VDQ      +LTD A ++ +
Sbjct: 252 LAISDPVFIVDQVAALHIKLTDTAHMINY 280


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 562 LITSMPVIMVDQTITGTCRLTDPAPVMTF 648
           L  S PV +VDQ      +LTD A ++ +
Sbjct: 252 LAISDPVFIVDQVAALHIKLTDTAHMINY 280


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 47  QTILQNSNWYKELSSTQKIFVNQHLVPVT 133
           Q +LQ+ N+ +E ++ +    NQ L P+T
Sbjct: 9   QAVLQSYNFLQEKTTYEYYENNQALPPIT 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,165
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)