Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0768
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    28   0.23 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   3.7  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 552 PNIPHNFNASNYGGPNHYGNMPVNGPGS 635
           PN+PHN N SN G  N +      GP S
Sbjct: 175 PNMPHNVNYSNTGFNNSHMGGGGGGPNS 202


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +2

Query: 29  VVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
           VVTLD++    +++W     S Q+I + ++L  +
Sbjct: 550 VVTLDVKNAFNSASWTAIARSLQRINIPKYLYDI 583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,719
Number of Sequences: 2352
Number of extensions: 10540
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)