Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0768
(663 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 27 0.16
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 27 0.16
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 27 0.16
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 27 0.16
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 27 0.16
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 1.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 24 1.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 1.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 24 1.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.6
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 23 3.4
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.0
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.9
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 8 RSNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
RS E + + +L +TI N+N YK+L ++ Q VPV
Sbjct: 75 RSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPV 115
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 8 RSNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
RS E + + +L +TI N+N YK+L ++ Q VPV
Sbjct: 75 RSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPV 115
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 8 RSNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
RS E + + +L +TI N+N YK+L ++ Q VPV
Sbjct: 75 RSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPV 115
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 8 RSNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
RS E + + +L +TI N+N YK+L ++ Q VPV
Sbjct: 75 RSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPV 115
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 8 RSNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
RS E + + +L +TI N+N YK+L ++ Q VPV
Sbjct: 308 RSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPV 348
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 14 NEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
+ + K+++ L + N+N YK+L ++ Q VPV
Sbjct: 298 SREPKIISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPV 336
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 14 NEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
+ + K+++ L + N+N YK+L ++ Q VPV
Sbjct: 309 SREPKIISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPV 347
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 14 NEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
+ + K+++ L + N+N YK+L ++ Q VPV
Sbjct: 309 SREPKIISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPV 347
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 14 NEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPV 130
+ + K+++ L + N+N YK+L ++ Q VPV
Sbjct: 298 SREPKIISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPV 336
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGNMPVN 623
I ++ +N+ SNY N+Y N N
Sbjct: 314 IISSLSNNYKYSNYNNYNNYNNNNYN 339
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 122 VPVTQMIKQFHQENVTGKKIDLSF 193
+ ++Q+I Q+NV GK+I F
Sbjct: 240 INISQVIACVGQQNVEGKRIPFGF 263
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IVSSLSNNYNYSNYNNYNNNNN 102
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 546 IAPNIPHNFNASNYGGPNHYGN 611
I ++ +N+N SNY N+ N
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNN 102
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 555 NIPHNFNASNYGGPNHYGNMPVN 623
N +N+N +NY +Y N +N
Sbjct: 101 NNKYNYNNNNYNKKLYYKNYIIN 123
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 555 NIPHNFNASNYGGPNHYGN 611
N +N+N +NY N+ N
Sbjct: 328 NYKYNYNNNNYNNNNYNNN 346
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,589
Number of Sequences: 438
Number of extensions: 3194
Number of successful extensions: 29
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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