Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0766
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8A715 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q4GYH0 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_UPI0000D56F8A Cluster: PREDICTED: similar to CG9494-PA;...    33   6.9  
UniRef50_A5N377 Cluster: Putative uncharacterized protein; n=1; ...    32   9.1  

>UniRef50_Q8A715 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 370

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 446 ICKF*MLFFIVTRNYIGCERIVFPRLLYFCIYFILYE 556
           +  F +LF ++ R  IGC  I  P LLYFC++F  ++
Sbjct: 100 LISFVVLFIVIRR--IGCGYIYLPILLYFCLFFCQFQ 134


>UniRef50_Q4GYH0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 72

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +2

Query: 467 FFIVTRNYIGCERIVFPRLLYFCIYFILYE---CVC-CIKCXNWKKKRK 601
           FF+ + N      +VFPR L F  YF+  +   CVC C+    W++K++
Sbjct: 10  FFVPSMNIFCLVGVVFPRSLLFYHYFLREKQSVCVCVCVAYKQWREKKR 58


>UniRef50_UPI0000D56F8A Cluster: PREDICTED: similar to CG9494-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9494-PA - Tribolium castaneum
          Length = 243

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 116 FTFIISDVSILYIREKIKEYFNNVNSIRYSRYVYA 220
           F F+++ V IL +   +K Y+N  N+    +Y+YA
Sbjct: 20  FLFVLTGVVILSVGASVKAYYNEYNTFLDDKYIYA 54


>UniRef50_A5N377 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 201

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 74  NVFAEFIN*SNLIVFTFIISDVSILYIREKIKEYFNNVNSIRY 202
           N++    N  +L  F FI   +S+LY  EKI+  F N+++ +Y
Sbjct: 96  NIYNYNKNFDSLFKFCFIDQYISLLYTNEKIENSFQNISNQQY 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,878,174
Number of Sequences: 1657284
Number of extensions: 7991474
Number of successful extensions: 17143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17087
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)