Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0766
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.12 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.49 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.65 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   8.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.0  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 237 CYCYEKAYTYREYRIELTLLKYSLIFSLIYKILTSEM 127
           C  Y K Y   +YR    +LKY +I   +  ILTS +
Sbjct: 22  CDSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSV 58


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 529 IQQSRKYNAFTTDIITCNDKKQHSKFTNKNIV 434
           I  SRK   F T++  CN K +H    +KN+V
Sbjct: 211 INDSRKVTRFPTELTFCN-KIKHLVNLHKNLV 241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 464 LFFIVTRNYIGCERIVFPRLLYFCIYFILY 553
           L F++   Y  C  I+   + YFC  FI++
Sbjct: 279 LLFLLCIYYFYCALIILLCIYYFCRAFIIF 308



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 434 YNVFICKF*MLFFIVTRNYIGCERIVFPRLLYFCIYFILY 553
           Y  FI     L F++   +  C  I+F   L FC  FI +
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 464 LFFIVTRNYIGCERIVFPRLLYF--CIY 541
           LFF++   Y  C  I+F   L F  CIY
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIY 167


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 319 VKFILDIHFTFFTMFICNEYKS 384
           ++F +  HF+F + F+C  + S
Sbjct: 65  IQFPISAHFSFMSRFLCLPFYS 86


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 319 VKFILDIHFTFFTMFICNEYKS 384
           ++F +  HF+F + F+C  + S
Sbjct: 21  IQFPISAHFSFMSRFLCLPFYS 42


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 198 RIELTLLKYSLIFSLIYKILTSEMIK-VKTIRFD*LINSAKTFFY*LEST 52
           RI        ++++ ++ ++T+ ++  V   RFD L+N +K   + L ST
Sbjct: 78  RITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLST 127


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 198 RIELTLLKYSLIFSLIYKILTSEMIK-VKTIRFD*LINSAKTFFY*LEST 52
           RI        ++++ ++ ++T+ ++  V   RFD L+N +K   + L ST
Sbjct: 78  RITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLST 127


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 198 RIELTLLKYSLIFSLIYKILTSEMIK-VKTIRFD*LINSAKTFFY*LEST 52
           RI        ++++ ++ ++T+ ++  V   RFD L+N +K   + L ST
Sbjct: 78  RITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLST 127


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 79  NIFLLTRIDKRFHFYHVKPLK 17
           N+FLL  I K    ++ KP+K
Sbjct: 119 NLFLLDNIVKPIIAFYYKPIK 139


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 434 YNVFICKF*MLFFIVTRNYI 493
           Y VF+  F +  F++ R+YI
Sbjct: 181 YKVFVDLFNLSTFLIPRSYI 200


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 434 YNVFICKF*MLFFIVTRNYI 493
           Y VF+  F +  F++ R+YI
Sbjct: 341 YKVFVDLFNLSTFLIPRSYI 360


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 434 YNVFICKF*MLFFIVTRNYI 493
           Y VF+  F +  F++ R+YI
Sbjct: 341 YKVFVDLFNLSTFLIPRSYI 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,944
Number of Sequences: 336
Number of extensions: 2605
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)