Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0765
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 539 SSNAFLFEGWAAVVTILETLELISQGGWRI 450
           + N+  + G A ++   E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 392  SSTHLSNKKNRRALPTGVNVTTK*IPTTA 306
            + TH +N+ +     + VN  T  IPT A
Sbjct: 1001 TETHTNNRTHSATSNSSVNANTNNIPTNA 1029


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 74   N*CLFKFFLFRAIFIL 121
            N  +F FF+F A+F+L
Sbjct: 1266 NKSVFAFFMFNALFVL 1281


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 74   N*CLFKFFLFRAIFIL 121
            N  +F FF+F A+F+L
Sbjct: 1266 NKSVFAFFMFNALFVL 1281


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 282 WLTSLHIVSGSRYSFCSDIDSCRKRT 359
           W+  +H+   S  +F   ++  R+RT
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRT 238


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 282 WLTSLHIVSGSRYSFCSDIDSCRKRT 359
           W+  +H+   S  +F   ++  R+RT
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRT 238


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 282 WLTSLHIVSGSRYSFCSDIDSCRKRT 359
           W+  +H+   S  +F   ++  R+RT
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRT 238


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 359 DDFFYCLDG 385
           D F+YC+DG
Sbjct: 123 DKFYYCVDG 131


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
 Frame = +3

Query: 567 YLPARTHK---RSYHHSPCLNH 623
           Y P   H+   +  HHSP LNH
Sbjct: 26  YEPHVAHRPGLQGLHHSPHLNH 47


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 417 WLLEPIDIYNVNAPPTLRYK 476
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,277
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)