Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0764
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 96 5e-21
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 43 4e-05
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 41 2e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 39 7e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 34 0.021
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 33 0.027
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 33 0.036
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 33 0.048
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 29 0.59
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 29 0.59
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 28 1.4
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 27 3.1
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 26 4.2
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 4.2
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 5.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 95.9 bits (228), Expect = 5e-21
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQS 178
I++YR YFG YDT + + L P + S+ + VTT +G+ SYP ++RRRMMM S
Sbjct: 205 IVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTS 264
Query: 179 GRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 346
G A + Y ++ C I EG FFKGA +N+LRG GA VL +YD+++ ++
Sbjct: 265 GEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 25.0 bits (52), Expect = 9.6
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +2
Query: 56 LPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKSDIL---YKNTIHCW 226
+ + KN+ + + V+ + P V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 227 ATIAKTEGTWXFFKGAFSNVLR 292
A EG ++G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 42.7 bits (96), Expect = 4e-05
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 IIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IISYPFXSVRRRMMMQS 178
+++ A YFG R L P + + IA T+ + G +S PF ++ R+
Sbjct: 172 VVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVP 231
Query: 179 GRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEI 334
A Y T+A+ EG +KG VLR G GG +LV+++ +
Sbjct: 232 RIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 34.7 bits (76), Expect = 0.012
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 71 NTPIVISWAIAQTVTTVAGIIS-YPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 247
N P +++A A V ++ +++ YP V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 248 GTWXFFKGAFSNVL 289
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +2
Query: 20 SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKSDI 199
+Y + + LP + V ++ + + + P +V+ RM QS A +
Sbjct: 183 AYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE- 239
Query: 200 LYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 346
YKN+IHC I +G F+ GA + R G V +Y+++ ++L
Sbjct: 240 -YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 38.7 bits (86), Expect = 7e-04
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Frame = +2
Query: 29 GFYDTARG-----MLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGR--A 187
GFY+ R L DPK + I+ A + PF V+ RM S +
Sbjct: 106 GFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPV 165
Query: 188 KSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 346
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 166 GQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 143 FXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR 292
F +V RM Q K+ LYKN I C ++EG + +KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.9 bits (74), Expect = 0.021
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +2
Query: 17 ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKSD 196
A YF + + + + P+ + A A +T ++ PF +++RM + S +
Sbjct: 93 AIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK---- 147
Query: 197 ILYKNTIHCWATIAKTEGTWXFF 265
YK+ +HC T+ + EG F+
Sbjct: 148 --YKSALHCATTVFRNEGLGAFY 168
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.5 bits (73), Expect = 0.027
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = +2
Query: 14 RASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKS 193
+ ++ G + + P P + A + I +P +R R+ Q G +
Sbjct: 313 KRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQTQ-GTSAH 371
Query: 194 DILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 346
Y I C+ K EG +KG N+L+ A ++Y+ KK L
Sbjct: 372 PATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.1 bits (72), Expect = 0.036
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = +2
Query: 17 ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV-AGIISYPFXSVRRRMMMQ----SG 181
A +F Y+ + L N P + + +A V + A ++ P ++ R+ +Q +
Sbjct: 88 ALFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNP 147
Query: 182 RAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 343
+S+ Y + IAK EG FF G + +LR F L+ Y+++++V
Sbjct: 148 HFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 32.7 bits (71), Expect = 0.048
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 128 IISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKG 271
++ PF V+ R+ QS + +Y N + C I+K EG F+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.1 bits (62), Expect = 0.59
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 95 AIAQTVTTVAGIISYPFXSVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTWXFFK 268
AIA +T+ A + P V+ R+ + +SG+A Y+++I C + EG +K
Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223
Query: 269 GAFSNVLRGTGGAFVLVLYDEIK 337
G +++L VLY++ K
Sbjct: 224 GLSASLLGVGESTLQWVLYEKFK 246
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 29.1 bits (62), Expect = 0.59
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 161 RMMMQSGRAKSDILYKNTIHCWATIAK--TEGTWXFFKGAFSNVLRGTGGAFVLVLY 325
R S KS ++ +T+ W A + G W + G + G GG + L+
Sbjct: 44 RFSTASRSVKSGLISSSTVSAWTWPATLLSSGAWSYTYGIMGGFMYGVGGTIQITLF 100
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +2
Query: 41 TARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKSDILYKNTIH 220
+ +G +P +N V+S I+ T I+ PF ++ R+ ++ +YKN +H
Sbjct: 201 SVQGTVPH-RNIVNVMSGLISGATATA---ITNPFDMLKTRVQLEPH------IYKNFLH 250
Query: 221 CWATIAKTEGTWXFFKGAFSNVLR 292
+ EG F G F VLR
Sbjct: 251 SAKLVYANEGFRGFLDGFFLRVLR 274
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 203 YKNTIHCWATIAKTEGTWXFFKGAFSNVLR 292
YKN I KTEG FF+G SN+L+
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 550 FDISIAFILYNLFFIQNGKWLV-FFM*HYLVW 642
F S +FILYNL + + FF H +VW
Sbjct: 849 FRFSFSFILYNLLISTSTVFFAGFFRRHLMVW 880
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 203 YKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 346
Y NT + I K EG F++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 50 GMLPDPKNTPIVISWAIAQTVTTV 121
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 321 KTSTKAPPVPLRTLEKAPL 265
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,221,196
Number of Sequences: 5004
Number of extensions: 37855
Number of successful extensions: 119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -