Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0764
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 118 3e-27
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 88 5e-18
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 87 2e-17
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 81 8e-16
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 44 1e-04
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 41 8e-04
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 41 8e-04
03_02_0646 + 10141967-10142476,10143721-10144254 37 0.012
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 37 0.016
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 36 0.037
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 35 0.066
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 35 0.066
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 34 0.11
08_02_1016 - 23606089-23607072 33 0.15
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 33 0.15
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 33 0.20
04_04_0048 + 22351788-22352177,22353175-22353711 33 0.20
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 33 0.20
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 33 0.26
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 32 0.35
09_04_0437 - 17587944-17588909 32 0.46
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 32 0.46
09_04_0628 + 19093665-19094033,19094408-19094722 28 7.5
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 118 bits (285), Expect = 3e-27
Identities = 55/115 (47%), Positives = 79/115 (68%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSG 181
++++R YFG +DTA+ ++ P ++P+ W AQ VT++AG+ISYP +VRRRMMMQSG
Sbjct: 225 MVVHRGLYFGGFDTAKDVMV-PLDSPLWQRWVTAQAVTSMAGLISYPLDTVRRRMMMQSG 283
Query: 182 RAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 346
+Y +T+ CW I K EG F++GA SN+ R TG A +LVLYDE+KK +
Sbjct: 284 MDVQ--MYSSTLDCWRKIYKVEGIKSFYRGALSNMFRSTGAAAILVLYDEVKKFM 336
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 88.2 bits (209), Expect = 5e-18
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQS 178
I +YR YFG YDT + + L P S+A+ +TT +G +YPF ++RRRMM+ S
Sbjct: 201 ITLYRGLYFGIYDTMKPLILVGPLQENFFASFALGWAITTFSGACAYPFDTLRRRMMLTS 260
Query: 179 GRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKK 340
G+ + YKN H I TEG + F+G +N+L G GA VL YD++ +
Sbjct: 261 GQP---LKYKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGAGVLAGYDQLHR 311
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 86.6 bits (205), Expect = 2e-17
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQS 178
II+YR YFG YD+ + + L S+A+ +T AG+ SYP +VRRRMMM S
Sbjct: 260 IIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTS 319
Query: 179 GRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIK 337
G A + YK+++ ++ I K EG FKGA +N+LR GA VL YD+++
Sbjct: 320 GEA---VKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQ 369
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 81.0 bits (191), Expect = 8e-16
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQS 178
II+YR YFG YD+ + + L + S+ + +T AG+ SYP +VRRRMMM S
Sbjct: 258 IIVYRGLYFGMYDSLKPVVLVGNLQDNFLASFLLGWGITIGAGLASYPIDTVRRRMMMTS 317
Query: 179 GRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 346
G A + Y +++ + I EG FKGA +N+LR GA VL YD+++ V+
Sbjct: 318 GEA---VKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVVV 370
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/97 (28%), Positives = 42/97 (43%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSG 181
I Y F FY+T + +P+ I+ A + I+YP VRR+M +Q+
Sbjct: 216 IFPYSGLKFYFYETMKTYVPEEHRKDIIAKLACGSVAGLLGQTITYPLDVVRRQMQVQAF 275
Query: 182 RAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR 292
+ + K T A IAK +G F G N L+
Sbjct: 276 SSSNLEKGKGTFGSIAMIAKHQGWRQLFSGLSINYLK 312
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +2
Query: 26 FGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAKSDI 199
F Y+T R + P ++P++IS A + I++P VRRRM ++ ++ +
Sbjct: 217 FCVYETLRSHWQIERPYDSPVLISLACGSLSGIASSTITFPLDLVRRRMQLEGAAGRARV 276
Query: 200 LYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGG-AFVLVLYDEIKKVL 346
+ I +TE ++G + V + Y+ +K +L
Sbjct: 277 YQTGLFGTFGHIVRTESLRGLYRGILPEYCKVVPSVGIVFMTYETLKSIL 326
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 122 AGIISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTG 301
A II+YP VR ++ Q + Y I C + + EG F++G +N+LR T
Sbjct: 233 ASIITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRGCATNLLRTTP 292
Query: 302 GAFV-LVLYDEIKKVL 346
A + Y+ I +++
Sbjct: 293 NAVITFTSYEMINRLM 308
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 152 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGA 307
V+ R+ Q G + + YK IHC TI EG + + GA V+R GT A
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 116 TVAGIISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR- 292
T I + PF V+ R+M Q GR DI YK +H TI EG +KG ++R
Sbjct: 262 TAGPICTGPFDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRI 319
Query: 293 GTGGAFVLVLYDEI 334
G A + + D++
Sbjct: 320 PPGQAIMWAVADQV 333
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 137 YPFXSVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTWXFFKGAFSNVLRGT 298
+P VR R + GR D+ Y+NT H TIA++EG + G + VL T
Sbjct: 34 HPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 35.5 bits (78), Expect = 0.037
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGRAK 190
Y A F +D + +P+ + S A A T A ++ YP +VRR+M M+
Sbjct: 262 YIAVNFCVFDLMKKSVPEKYKSRPETSLATALLSATFATLMCYPLDTVRRQMQMKGSP-- 319
Query: 191 SDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 346
Y + I + +G ++G N L+ + + L +D +K ++
Sbjct: 320 ----YNTVLDAIPGIVERDGLIGLYRGFVPNALKNLPNSSIKLTAFDTVKTLI 368
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGMLPDP-KNTPI--VISWAIAQTVTTVAGIISYPFXSVRRRMMM 172
++ Y A+ + YDT + + K I + + I ++ ++P R++M
Sbjct: 295 VVPYAATNYYAYDTLKKLYRKTFKQEEISNIATLLIGSAAGAISSTATFPLEVARKQM-- 352
Query: 173 QSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 346
Q G +YKN H I + EG +KG + ++ A + + Y+ KK+L
Sbjct: 353 QVGAVGGRQVYKNVFHALYCIMENEGIGGLYKGLGPSCIKLMPAAGISFMCYEACKKIL 411
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 230 TIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 346
+I KTEG F+G F NV+R A L +D KK L
Sbjct: 179 SIMKTEGWTGLFRGNFVNVIRVAPSKAIELFAFDTAKKFL 218
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = +2
Query: 116 TVAGIISYPFXSVRRRMMM---------QSGRAKSDILYKNTIHCWATIAKTEGTWXFFK 268
T+ ++YP +RRRM M +G K + Y I + + EG +K
Sbjct: 261 TIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYK 320
Query: 269 GAFSNVLRGTGG-AFVLVLYDEIKKVL 346
G N ++ A V Y+ ++KVL
Sbjct: 321 GLVPNSVKVVPSIAIAFVTYEFVQKVL 347
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSG 181
I+ Y F Y+ + +P+ +V+ + ++YP VRR+M +Q+
Sbjct: 207 ILPYAGLKFYIYEDLKSRVPEDYKRSVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQNK 266
Query: 182 R---AKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGG-AFVLVLYDEIKKVL 346
+ A + T A I + +G F G N ++ A YD +K +L
Sbjct: 267 QPHNANDAFRIRGTFQGLALIIRCQGWRQLFAGLSLNYVKVVPSVAIGFTTYDMMKNLL 325
>08_02_1016 - 23606089-23607072
Length = 327
Score = 33.5 bits (73), Expect = 0.15
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Frame = +2
Query: 5 IIYRASYFGFYDTA-------RGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRR 163
+I AS YD A RG D T +V S+A VA S P V+ R
Sbjct: 205 MIVTASQLATYDQAKEAILARRGPGADGLGTHVVASFAAG----LVAAAASNPVDVVKTR 260
Query: 164 MMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGGAFVLVLYDEIKKV 343
+M + Y I C ++EG +KG V R G F +VL+ +++V
Sbjct: 261 VMNMKVAPGAPPPYSGAIDCALKTVRSEGVMALYKGFIPTVSR--QGPFTVVLFVTLEQV 318
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 122 AGIISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GT 298
A ++YP VR R+ Q K+ YK H +TI + EG +KG + +L G
Sbjct: 126 AASVTYPLDVVRTRLATQ----KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGP 181
Query: 299 GGAFVLVLYDEIK 337
A +Y+ ++
Sbjct: 182 SIAISFTVYESLR 194
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Frame = +2
Query: 62 DPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSGR-AKSDILYKNTIHCWATIA 238
D K P+V I T + + P RM S A YKN H IA
Sbjct: 110 DGKPLPLVQKAGIGLTAGAIGACVGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIA 169
Query: 239 KTEGTWXFFKGAFSNVLRGTG-GAFVLVLYDE 331
EG +KGA V+R +L YD+
Sbjct: 170 ADEGVLALWKGAGPTVVRAMSLNMGMLASYDQ 201
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 122 AGIISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTG 301
A +S P ++ RMM Q AK +LY+N+ C K EG +KG R
Sbjct: 230 ATTLSCPADVIKTRMMNQGKDAK--VLYRNSYDCLVKTVKHEGLTALWKGFLPTWARLGP 287
Query: 302 GAFVL-VLYDEIKK 340
FV V Y+++++
Sbjct: 288 WQFVFWVSYEKLRQ 301
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 182 RAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR 292
R D YK+T+ C+A K +G F+KG +N R
Sbjct: 237 RMMGDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCR 273
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 182 RAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 343
R D Y +TI C+ K +G F+KG N R G+ + + ++++K+
Sbjct: 243 RMMGDSAYTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNVIMFLTLEQVQKL 297
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 200 LYKNTIHCWATIAKTEGTWXFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 343
+Y+N HC + TEG +KG F+ R G A V+ ++++++
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLREL 859
>09_04_0437 - 17587944-17588909
Length = 321
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 119 VAGIISYPFXSVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGT 298
VA S P V+ R+M A + Y + C ++EG +KG V R
Sbjct: 240 VAASASTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTR-- 297
Query: 299 GGAFVLVLYDEIKKV 343
G F +VL+ +++V
Sbjct: 298 QGPFTIVLFVTLEQV 312
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 31.9 bits (69), Expect = 0.46
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Frame = +2
Query: 2 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFXSVRRRMMMQSG 181
I+ Y F Y+ + +P+ + + + ++YP VRR+M +QS
Sbjct: 204 ILPYAGLKFYIYEGLKAHVPEDYKNSVTLKLSCGAAAGLFGQTLTYPLDVVRRQMQVQSQ 263
Query: 182 RAKSDI---LYKNTIHCWATIAKTEGTWXFFKGAFSNVLRGTGG-AFVLVLYDEIKKVL 346
+ + T I +T+G F G N ++ A YD +K +L
Sbjct: 264 QYHDKFGGPQIRGTFQGLMIIKQTQGWRQLFAGLSLNYIKVVPSVAIGFTAYDTMKSLL 322
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 214 GVLVQDIALGTTRLHHHAP 158
G V+ +ALG LHHHAP
Sbjct: 8 GGAVEGLALGIAPLHHHAP 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,456
Number of Sequences: 37544
Number of extensions: 238407
Number of successful extensions: 520
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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