Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0763
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 31 0.11
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 31 0.15
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.19
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.26
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 30 0.34
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.34
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 30 0.34
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.59
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 29 0.78
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.78
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 29 0.78
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.0
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 28 1.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 27 3.1
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 26 5.5
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 25 7.3
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.3
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 25 7.3
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2
Query: 388 GEWPAALSXGQKQRVALARALI 323
G+ ++LS GQKQR+A+ARALI
Sbjct: 1253 GQKGSSLSGGQKQRIAIARALI 1274
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2
Query: 370 LSXGQKQRVALARALI 323
+S GQKQR+A+ARA+I
Sbjct: 568 MSGGQKQRIAIARAVI 583
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 409 DPARDRAGEWPAALSXGQKQRVALARALI 323
D R GE LS G+KQRVA+ARA++
Sbjct: 708 DGYNSRVGERGLKLSGGEKQRVAVARAIL 736
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 0.19
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 73 SANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPCS 228
S + T P STV F SS +T S + T+S ++ ++NSTV P S
Sbjct: 598 SGSVTTPTSTPLSNSTVAPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTS 649
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 230 AKVTQSNPDLES--R*GVQRPERFIKQQ*SRSMNQRSCQRHSLFLPARKCGR 379
A++T +PDL+S + G+ + +K+ S+ M SCQR LFL +K R
Sbjct: 1144 AEITSPSPDLDSVMKLGLSDLQNHVKRI-SKEMEIISCQRQLLFLENKKLKR 1194
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 388 GEWPAALSXGQKQRVALARAL 326
GE LS GQKQR+ALARA+
Sbjct: 734 GEKGVTLSGGQKQRIALARAV 754
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 367 SXGQKQRVALARALIHR 317
S GQKQ +ALARA++ R
Sbjct: 1357 SQGQKQVLALARAIVRR 1373
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 58 TSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPCSCQS 237
+S+SSS+ + + IS+ S P+S +ST S+ +++S + T+ST+ S S
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 238 DT 243
+
Sbjct: 315 SS 316
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 64 ASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPCSCQSDT 243
+SSS++ + P ST+ S SS ST S I+++S +S +ST+ S S +
Sbjct: 274 SSSSSSSSSPTSTS---STISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSS 330
Score = 26.6 bits (56), Expect = 3.1
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 25 SDSPRCITRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINS---TRSAIATASLTS 195
S S ++ ++S SSA T + S+V S PSS +S T S+++T+S+ S
Sbjct: 183 SSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPS 242
Query: 196 CVTNSTVKPCSCQSDT 243
++S+ S S +
Sbjct: 243 TSSSSSSTSSSLSSSS 258
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 64 ASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIA--TASLTSCVTNSTVKPCSCQS 237
+SSS + + ST+ S + SSI ST S+ + ++SL+S ++ST S S
Sbjct: 211 SSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSS 270
Query: 238 DTI 246
I
Sbjct: 271 SII 273
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 55 NTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASL------TSCVTNSTV 216
++S SSS T ST S+P S+ +ST S+ A S +S V +S+
Sbjct: 161 SSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSS 220
Query: 217 KPCSCQSDTI 246
P S S T+
Sbjct: 221 SPSSSSSSTL 230
Score = 25.4 bits (53), Expect = 7.3
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 25 SDSPRCITRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCV- 201
S SP + +S+SSS++ +S+ S P+S +ST S+ +++ +S
Sbjct: 297 SSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFS 356
Query: 202 -TNSTVKPCSCQSDTI 246
T S+ K S S T+
Sbjct: 357 STTSSSKSSSSFSSTV 372
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -2
Query: 376 AALSXGQKQRVALARALI 323
A+LS GQ+QR+ALARAL+
Sbjct: 569 ASLSGGQQQRIALARALL 586
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.59
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 58 TSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPCSCQS 237
TS S + + + P +ST + + P+S +ST I S +S TNS+ P + S
Sbjct: 225 TSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTS 284
Query: 238 DT 243
T
Sbjct: 285 CT 286
Score = 28.7 bits (61), Expect = 0.78
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Frame = +1
Query: 25 SDSPRCITRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVT 204
S P T C TS S P +ST + + P+S +ST I S +S T
Sbjct: 106 SPLPSTSTSCTTSTS-----IPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDT 160
Query: 205 NSTVKPCSCQSDTIKXXXXXXXXXXXXXXXHQATIIPVD-ESTLLPAP 345
NS P + S T T+ P ST +P P
Sbjct: 161 NSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 208
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +1
Query: 34 PRCITRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNST 213
P T C TS S P +ST + + P+S +ST I S +S TNS+
Sbjct: 166 PTTSTSCTTSTS-----IPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSS 220
Query: 214 VKPCSCQSDT 243
P + S T
Sbjct: 221 PLPTTSTSCT 230
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 28.7 bits (61), Expect = 0.78
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 376 AALSXGQKQRVALARAL 326
++LS GQKQRV+LARAL
Sbjct: 705 SSLSGGQKQRVSLARAL 721
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +1
Query: 46 TRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPC 225
T ++++SS+A + + S+ S PI SSI S+ S+ A++S++S +S+
Sbjct: 137 TSASSTSSSTATPSSSSTTSSSSSSSSSTPI-SSSITSSISSSASSSVSSSSASSSGSIS 195
Query: 226 SCQSDTI 246
S + T+
Sbjct: 196 SADAKTV 202
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 28.7 bits (61), Expect = 0.78
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2
Query: 370 LSXGQKQRVALARALI 323
LS GQKQR+A+ARAL+
Sbjct: 620 LSGGQKQRIAIARALL 635
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 409 DPARDRAGEWPAALSXGQKQRVALARALIHR 317
D + GE +LS GQK R++LARA+ R
Sbjct: 693 DGDQTEVGEKGISLSGGQKARISLARAVYSR 723
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 388 GEWPAALSXGQKQRVALARAL 326
G+ A+LS GQK R++LARA+
Sbjct: 698 GQKGASLSGGQKSRISLARAI 718
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 412 QDPARDRAGEWPAALSXGQKQRVALARALI 323
+D R E A S GQ+Q + LAR L+
Sbjct: 1349 EDGLYSRVAEGGANFSSGQRQLICLARVLL 1378
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 55 NTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNS 210
+ S+ SS++ DP+ + S S S+ S++ATAS T T+S
Sbjct: 952 SASSWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSS 1003
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 88 DPNRRGRGISTVKSRPIFPSSINSTRSAIATASLTSCVTNSTVKPCSCQSDT 243
D NR G+ K PS+ N T + T+ +T+ T +T K S SDT
Sbjct: 759 DTNRIGKTFRGHKPASR-PSTANGTSNQNTTSEITTSETTATEKTPSNSSDT 809
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 413 FARLLSPXTESSQVSFNNLSFXETPPKSIIEALRQ 517
FARL P ++ +F L + P ++EA R+
Sbjct: 124 FARLSDPDLATNDTAFYQLLYPPIPKDELVEAYRK 158
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 215 TVLLVTHDVSEAVAMADRVLLIE 147
T +V HD A +ADRV+L E
Sbjct: 508 TAFIVEHDFIMATYLADRVILFE 530
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 34 PRCITRCNTSASSSANRTDPNRRGRGISTVKSRPIFPSSINSTRSAIATAS 186
P R +TS+SSS++ + + ST S P S+ +S+ +++ TAS
Sbjct: 46 PSLYRRASTSSSSSSSSISTSHDSQP-STSSSSPSSTSTSSSSGTSVITAS 95
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 98 DADGGYPLSNPDQFFPLQLTAPGQPS 175
D DGG P+S P + PL +A G S
Sbjct: 179 DIDGGIPISIPSKNRPLAGSASGSSS 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,441,210
Number of Sequences: 5004
Number of extensions: 44762
Number of successful extensions: 161
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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