Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0763
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.8  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   4.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.9  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    24   4.9  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   4.9  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   6.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.4  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   8.5  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   8.5  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 429 LNRRANKIPP-GIAQGNGLPHFLAGRNSEWRWQE 331
           ++R A+ I   G+A   GLPH +  R   WRW +
Sbjct: 65  ISRNASAIGENGVALKKGLPHVICCR--LWRWPD 96


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 155 TAPGQPSLPLRSHHASPTV 211
           +APG  S+PL  H  SP V
Sbjct: 146 SAPGTSSVPLTIHRRSPGV 164


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 155 TAPGQPSLPLRSHHASPTV 211
           +APG  S+PL  H  SP V
Sbjct: 146 SAPGTSSVPLTIHRRSPGV 164


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 155 TAPGQPSLPLRSHHASPTV 211
           +APG  S+PL  H  SP V
Sbjct: 122 SAPGTSSVPLTIHRRSPGV 140


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 155 TAPGQPSLPLRSHHASPTV 211
           +APG  S+PL  H  SP V
Sbjct: 122 SAPGTSSVPLTIHRRSPGV 140


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 RCFCPXESAAGHSPARSLAGSCLPAC 425
           RC+    S+   +   S++ SCLP C
Sbjct: 402 RCYEQIRSSIAFTANTSISCSCLPGC 427


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 RCFCPXESAAGHSPARSLAGSCLPAC 425
           RC+    S+   +   S++ SCLP C
Sbjct: 402 RCYEQIRSSIAFTANTSISCSCLPGC 427


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 535 SARSLPLSQGFNNAFWR 485
           +A S  +SQG  NA+W+
Sbjct: 372 TAASAAVSQGIRNAYWQ 388


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +2

Query: 320 MNQRSCQRHSLFLPARKCGRPFPCAIP--GGILFARLLS 430
           +  R+C  H  F P+  C  P  C++       FA+LLS
Sbjct: 364 VQSRNCNHHHGFHPSTVCKIPPGCSLKIFNNQEFAQLLS 402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,939
Number of Sequences: 2352
Number of extensions: 12491
Number of successful extensions: 50
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)