Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0762
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.6  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 643 DNSSRIRQNAEKHNHVPINNTLTI 572
           DN+  + +N EKH+  P   T  I
Sbjct: 195 DNNEILLRNGEKHHSFPFRKTTEI 218


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 224  FGAHF*RREYTSIFFILLPITLYML 298
            F A F    +TS ++ ++PI  +ML
Sbjct: 935  FVAAFQIDNWTSFYYNIIPILFFML 959


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 224  FGAHF*RREYTSIFFILLPITLYML 298
            F A F    +TS ++ ++PI  +ML
Sbjct: 935  FVAAFQIDNWTSFYYNIIPILFFML 959


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 224  FGAHF*RREYTSIFFILLPITLYML 298
            F A F    +TS ++ ++PI  +ML
Sbjct: 935  FVAAFQIDNWTSFYYNIIPILFFML 959


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 224  FGAHF*RREYTSIFFILLPITLYML 298
            F A F    +TS ++ ++PI  +ML
Sbjct: 935  FVAAFQIDNWTSFYYNIIPILFFML 959


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 263 IYSCILASKNELQTFYCLAHKKCTRSENAPSFTSIY 156
           I++ IL + NE+QT + +       S+    F S+Y
Sbjct: 223 IHNEILVTHNEIQTIFSVPLLMKIASQFVGIFCSLY 258


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 263 IYSCILASKNELQTFYCLAHKKCTRSENAPSFTSIY 156
           I++ IL + NE+QT + +       S+    F S+Y
Sbjct: 48  IHNEILVTHNEIQTIFSVPLLMKIASQFVGIFCSLY 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,762
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)