Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0761
         (664 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kina...    29   2.1  
At5g57580.1 68418.m07194 calmodulin-binding protein similar to c...    28   4.8  
At3g48850.1 68416.m05335 mitochondrial phosphate transporter, pu...    27   8.4  

>At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kinase
            family protein low similarity to SP|Q9Z1T6 FYVE
            finger-containing phosphoinositide kinase (EC 2.7.1.68)
            (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
            (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
            profile PF01504: Phosphatidylinositol-4-phosphate
            5-Kinase
          Length = 1456

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 341  VVDIDLNEPWYLQKEMWYXISFTWPHNVLPTYTYVVEFRDKFLRY 475
            ++D      W  Q E W   S   P NV PT    ++++ +F ++
Sbjct: 1394 IIDYLRQYTWDKQLETWVKSSLVVPKNVQPTVISPIDYKTRFRKF 1438


>At5g57580.1 68418.m07194 calmodulin-binding protein similar to
           calmodulin-binding protein TCB60 GI:1698548 from
           [Nicotiana tabacum]
          Length = 647

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 202 VGTQSELINTDLLAFTRQFRMKFGVSIIIGAIDLIELR 89
           VGT  EL+ TD  ++ R  + + G+ ++ G  D + +R
Sbjct: 192 VGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRIR 229


>At3g48850.1 68416.m05335 mitochondrial phosphate transporter,
           putative similar to mitochondrial phosphate transporter
           GI:3318617 from [Arabidopsis thaliana]
          Length = 363

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 511 PVNTGTSFSGSYLAGLKFC 567
           PV  G SF+G Y+AG+ FC
Sbjct: 262 PVQLGVSFAGGYIAGI-FC 279


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,367,654
Number of Sequences: 28952
Number of extensions: 259843
Number of successful extensions: 570
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)