Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0760
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 66 6e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 62 5e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 5e-10
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 57 2e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 57 2e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 56 5e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 55 8e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 55 8e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 54 2e-07
AE014298-3207|ABI31000.1| 374|Drosophila melanogaster CG41477-P... 29 6.1
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 65.7 bits (153), Expect = 6e-11
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
++ RSK+SL NK+T+YK + P Y + A H K Q IQ++ R+ G WF
Sbjct: 779 LLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWF 838
Query: 52 VRNVDLHDDLDLVSI 8
VRN LH DL L ++
Sbjct: 839 VRNTTLHRDLKLATV 853
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 62.5 bits (145), Expect = 5e-10
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
+I RS +SL K LY + ++P+ TY S + +A+R + Q QSR RI GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 52 VRNVDLHDDLDL 17
+RN ++H DL +
Sbjct: 830 LRNENIHRDLKI 841
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 62.5 bits (145), Expect = 5e-10
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
+I RS +SL K LY + ++P+ TY S + +A+R + Q QSR RI GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 52 VRNVDLHDDLDL 17
+RN ++H DL +
Sbjct: 830 LRNENIHRDLKI 841
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = -2
Query: 235 PMICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPW 56
P+I R+SK+S+ NK+ ++KT P++ Y S V A+ H K Q+ Q++ ++ + P+
Sbjct: 803 PLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 862
Query: 55 FVRNVDLH 32
+ LH
Sbjct: 863 YTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = -2
Query: 235 PMICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPW 56
P+I R+SK+S+ NK+ ++KT P++ Y S V A+ H K Q+ Q++ ++ + P+
Sbjct: 751 PLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 810
Query: 55 FVRNVDLH 32
+ LH
Sbjct: 811 YTNTKYLH 818
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 56.0 bits (129), Expect = 5e-08
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = -2
Query: 217 SKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWFVRNVD 38
S +SL +KV LY + ++P+ TY S + +A+ + Q QS+ R GAPW+VR+ +
Sbjct: 777 SPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSEN 836
Query: 37 LHDDLDLVSIS 5
+ DL++ S++
Sbjct: 837 IQRDLNIPSVT 847
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 55.2 bits (127), Expect = 8e-08
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
+I R+K+SL KV +YK+ + P + Y V AA+ H +++Q++ R GAPW+
Sbjct: 784 LIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWY 843
Query: 52 VRNVDLHDDL 23
+R D+ DL
Sbjct: 844 MRTRDIERDL 853
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 55.2 bits (127), Expect = 8e-08
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
+I R+K+SL KV +YK+ + P + Y V AA+ H +++Q++ R GAPW+
Sbjct: 586 LIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWY 645
Query: 52 VRNVDLHDDL 23
+R D+ DL
Sbjct: 646 MRTRDIERDL 655
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = -2
Query: 232 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVVXHAARIHXKSFQVIQSRFCRIAVGAPWF 53
++ R+S M+LR K +Y C+ P+ Y + AA+ + QV+Q+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 52 VRNVDLHDDLDLVSISK 2
VR LH DL+L ++ +
Sbjct: 845 VRGTTLHRDLNLHTVEE 861
>AE014298-3207|ABI31000.1| 374|Drosophila melanogaster CG41477-PA
protein.
Length = 374
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 176 LHTPRHDLCKCSGXSRGPHTLXIIPSHSIPFLQDSRRSPVVR 51
L+T RH CKC R P T I HS + S V++
Sbjct: 100 LNTKRHGECKCKCKCRSPDTKLKIDCHSWSSVSQSVSQSVIQ 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,627,077
Number of Sequences: 53049
Number of extensions: 476981
Number of successful extensions: 850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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