Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0760
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g17840.1 68415.m02066 senescence/dehydration-associated prote...    27   9.0  

>At2g17840.1 68415.m02066 senescence/dehydration-associated
           protein-related (ERD7) similar to senescence-associated
           protein 12 [Hemerocallis hybrid cultivar]
           gi|3551958|gb|AAC34857; strong similarity to
           early-responsive to dehydration stress ERD7 protein
           [Arabidopsis thaliana] gi|15320412|dbj|BAB63916;
           identical to cDNA ERD7 partial cds GI:15320411
          Length = 452

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 638 MHLYCVSLSISSICGQIENRXIVFVXNIIPLLCSLGD 528
           +HL   S S+   CG +E   IV   N++ +L S+ D
Sbjct: 80  LHLIDKSYSVELACGDLEIIRIVQGENVVAVLASVSD 116


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,711,144
Number of Sequences: 28952
Number of extensions: 216063
Number of successful extensions: 346
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)