Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0759
(696 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 25 0.59
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 2.4
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 5.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 5.5
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 21 7.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.6
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 9.6
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 25.0 bits (52), Expect = 0.59
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 482 WLYYYAVLVNNRKQADGIY*DSC 414
WLY A+ V++RK GI+ C
Sbjct: 12 WLYLTAIYVSSRKSDSGIWYWQC 34
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -1
Query: 609 TSSKLLLIIK*YFSCVLFYCCHSILMEFI 523
T+S + +I YF+C++F S+++ +
Sbjct: 266 TTSDAVPLIGTYFNCIMFMVASSVVLTVV 294
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -1
Query: 609 TSSKLLLIIK*YFSCVLFYCCHSILMEFI 523
T+S + +I YF+C++F S+++ +
Sbjct: 266 TTSDAVPLIGTYFNCIMFMVASSVVLTVV 294
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 23.0 bits (47), Expect = 2.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 535 YGVHILLDHVNQAM*TPNGYIIMLY*LTIESRQMA--FIETVVSLSRVFFQNIESVNLYH 362
Y VH++ + PN YI + E+ F+ + F++++ +LYH
Sbjct: 288 YNVHLMWSKPDLI---PNYYIAHFINIDPENHNKTEIFLNITGDKTNSVFEHVKLGSLYH 344
Query: 361 ISILSTNS 338
IS ++ +S
Sbjct: 345 ISFMACSS 352
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = -2
Query: 251 ETFHYHNYTIDNYLLLFTKH 192
+T+ +HN + +N ++ KH
Sbjct: 574 KTYDFHNMSFENDFIIQPKH 593
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 269 LLPLLFETFHYHNYTIDNYLLLFTK 195
LL + + T H+ NY D + F K
Sbjct: 205 LLIISYSTLHFVNYIDDLFFFRFEK 229
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 597 LLLIIK*YFSCVLFYCCHSILMEFIFYWITLIKLCKPLMAILLC 466
LL+ I ++ L +CC I+ ++ I + ILLC
Sbjct: 254 LLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 594 KVYWRFMSNISIILFNRQKNYLILTKPN 677
K+Y +F+++I I+LF + L+ P+
Sbjct: 6 KLYQKFVNSIRILLFQSRIFGLVTFTPD 33
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -1
Query: 576 YFSCVLFYCCHSILMEFI 523
YF+C++F S+++ +
Sbjct: 277 YFNCIMFMVASSVVLTVV 294
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -1
Query: 576 YFSCVLFYCCHSILMEFI 523
YF+C++F S+++ +
Sbjct: 277 YFNCIMFMVASSVVLTVV 294
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -1
Query: 576 YFSCVLFYCCHSILMEFI 523
YF+C++F S+++ +
Sbjct: 277 YFNCIMFMVASSVVLTVV 294
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2
Query: 218 NYLLLFTKHSRMCYILRI 165
+YLL+F + C+ +R+
Sbjct: 179 SYLLIFVQQIPFCFFVRV 196
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,370
Number of Sequences: 336
Number of extensions: 3043
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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