Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0759
         (696 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative ...    28   5.1  
At1g22000.1 68414.m02752 F-box family protein contains F-box dom...    27   9.0  

>At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative
           similar to delta7 sterol C-5 desaturase GI:5031219 from
           [Arabidopsis thaliana]
          Length = 279

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 576 YFSCVLFYCCHSILMEFIFYWI 511
           +F C L+   + +L+EF+ YW+
Sbjct: 126 WFLCFLYIALYLVLVEFMIYWV 147


>At1g22000.1 68414.m02752 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 727

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = -1

Query: 573 FSCVLFYCCHSI----LMEFIFYWITLIKLCKPLMAIL 472
           FS  +  CC++I    L+EF F+ I+L+    PLM +L
Sbjct: 315 FSKSMVACCNAIKFSWLIEFYFFPISLVDWLMPLMFLL 352


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,199,358
Number of Sequences: 28952
Number of extensions: 212437
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)