Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0758
         (685 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I383 Cluster: Putative uncharacterized protein PFI032...    34   3.7  
UniRef50_Q25770 Cluster: Asparagine-rich antigen; n=3; Plasmodiu...    34   3.7  
UniRef50_A5E2H2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q8I383 Cluster: Putative uncharacterized protein PFI0325c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0325c - Plasmodium falciparum (isolate 3D7)
          Length = 843

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 642 NNRYNEMVRLNSDIKPSTNNSNHSPSEGQCAHYN 541
           NN YN M   N  I  S+NN+N++  E    H+N
Sbjct: 643 NNNYNNMTTTNGSINYSSNNNNNNNIEDNFNHFN 676


>UniRef50_Q25770 Cluster: Asparagine-rich antigen; n=3; Plasmodium
            falciparum|Rep: Asparagine-rich antigen - Plasmodium
            falciparum
          Length = 1256

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = -2

Query: 639  NRYNEMVRLNSDIKPSTNNSNHSPSEGQCAHYNVFSTIIVR*VAWNFSIKSNINI*E--- 469
            N  N MV  N D   + N SN+ P  G     N+ S ++    A    +  N NI     
Sbjct: 882  NMLNNMVNSNMDNNVNNNYSNNYPGSGNNGLNNMTSCVMNNNGA-EIDMDDNDNIENNDH 940

Query: 468  --ILTYKLVQNYNNSSLIQTITQTNV 397
              ++T +   + NN S+I T T TN+
Sbjct: 941  ENMMTLEKEDSINNDSIITTTTATNI 966


>UniRef50_A5E2H2 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 688

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 678 TIVLVQQLWSY*NNRYNEMVRLNSDI-KPSTNNSNHSPSEGQCAHYNVFSTI 526
           T+  +Q L+ Y NN +N   RLN  +   +TNN+N+S ++ Q A +  FS +
Sbjct: 385 TVKPLQSLYDYENN-HNNRSRLNDGLYHTTTNNNNNSLNKVQKATHEYFSNV 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,800,247
Number of Sequences: 1657284
Number of extensions: 10064728
Number of successful extensions: 21299
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21199
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)