Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0757
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 7e-05
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 41 0.001
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.017
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.023
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.053
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 33 0.22
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 32 0.38
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.50
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.66
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.87
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 30 1.5
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.0
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.5
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 4.6
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.6
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 29 4.6
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 6.1
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 8.1
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.1
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 91.5 bits (217), Expect = 6e-19
Identities = 55/130 (42%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Frame = +2
Query: 227 FAKDFLAGGTXXXXXXXXXXXIXRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 403
F ++F G I RVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 404 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSGRYFXXXXXXXXXXXXT 583
LSFWRGN AN IRYFPTQALNFAFKD+ K +F T S+ F
Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKALFKPKKT--DSNAIKFSKNIASGGAAGAM 126
Query: 584 SLCFVYPLDF 613
SL FVY LD+
Sbjct: 127 SLFFVYSLDY 136
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 353 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 505
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +2
Query: 233 KDFLAGGTXXXXXXXXXXXIXRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 412
K LAGG + RVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 413 FWRGNFANVIRYFPTQALNFAFKDKYKQ 496
+++GN NVIR FP A+ FA ++YK+
Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +2
Query: 248 GGTXXXXXXXXXXXIXRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 427
GG + R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 428 FANVIRYFPTQALNFAFKDKYKQV 499
ANVI+ P + F +K K++
Sbjct: 197 GANVIKIAPESGIKFFAYEKAKKL 220
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 311 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 490
L+V I +Y+G++ A I +++G+ SF+RG F +++ P ++ A +
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310
Query: 491 KQVFL 505
K +L
Sbjct: 311 KNFYL 315
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 311 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 475
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 299 VKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 454
+K L VQHV+K A YKG+ A I +E+G+L+ ++G + + FP
Sbjct: 176 IKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 MSNLADPVAFAKDFLAGGTXXXXXXXXXXXIXRVKLLLQVQ-HVSKQIAADQRYKGIVDA 376
MS + F ++F G I RVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 377 FVRIPKEQGLLSFWR 421
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 353 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 496
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 338 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 502
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 356 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 505
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 356 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 487
YKG +D RI + +G+ + W+G R P L F F ++
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQ 176
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 365 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 499
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 368 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 493
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 299 VKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 472
VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P A+ F
Sbjct: 57 VKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYF 113
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 353 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 472
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 34.3 bits (75), Expect = 0.093
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 386 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSGR 538
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG+
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSGQ 185
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 386 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 499
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/63 (20%), Positives = 32/63 (50%)
Frame = +2
Query: 314 QVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 493
++Q+ + A++ YK +D F ++ + +G + +RG ++ P +A+ D +
Sbjct: 940 RMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVR 999
Query: 494 QVF 502
+F
Sbjct: 1000 GIF 1002
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 299 VKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 424
+K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 445 IKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +2
Query: 239 FLAGGTXXXXXXXXXXXIXRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 418
F +GG + VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 419 RGNFANVIRYFPTQA 463
+G A ++R FPT A
Sbjct: 421 QGLLATILRGFPTNA 435
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 386 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSS 532
+P+E L + G ++VI F A+N F+++YK+VF A R R+S
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNS 311
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = +2
Query: 230 AKDFLAGGTXXXXXXXXXXXIXRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 409
A++ +AG + +K+ LQ + K +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 410 SFWRGNFANVIRYFPTQALNF 472
++G + ++ P+ AL F
Sbjct: 80 GLYKGMLSPLLMATPSTALTF 100
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +2
Query: 308 LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 487
L++++ + +I YK + AF +I K++G L W G V R D
Sbjct: 137 LVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPTVKRAACISGTQIPTYDH 196
Query: 488 YKQVFLGA 511
K + L A
Sbjct: 197 TKHLLLNA 204
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 386 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSGRY 541
+P+E +L + G ++VI F A+N FK++YK++ T R G +
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEGEH 318
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 362 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 499
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +2
Query: 239 FLAGGTXXXXXXXXXXXIXRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 418
F++G T + V+ L VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 419 RGNFANVIRYFP 454
+G +++ P
Sbjct: 90 KGLVPSLVSIAP 101
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 356 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 472
Y+G++ + KE+G+ +F+R + P Q L+F
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHF 70
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 626 PVTCESRGGTRSTERWLRRHHRRPDYQRSNAQNCVFLSTRRGTPACTCP 480
P CE G WL+RH R + SN + V ++++ P P
Sbjct: 466 PWKCEDCGLAFKWSSWLQRHQRNNCHGESNKKAVVTVTSKMQAPRSDAP 514
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 389 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 505
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 255 VPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 127
+PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 540 LPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 STARQQADRRRPALQGYRRR-LRAHPQGAGSP 408
S RQQ R RP +GY +R R +P+ SP
Sbjct: 86 SNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 STARQQADRRRPALQGYRRR-LRAHPQGAGSP 408
S RQQ R RP +GY +R R +P+ SP
Sbjct: 186 SNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 STARQQADRRRPALQGYRRR-LRAHPQGAGSP 408
S RQQ R RP +GY +R R +P+ SP
Sbjct: 264 SNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 STARQQADRRRPALQGYRRR-LRAHPQGAGSP 408
S RQQ R RP GY +R R +P+ SP
Sbjct: 87 SNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 680 PRPENSRWPSPLPTSAARPVTCESRG 603
P+P + P P+ TSAA+P+T + G
Sbjct: 836 PQPITTSAPQPITTSAAQPITTLAAG 861
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 34 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 177
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,639,228
Number of Sequences: 59808
Number of extensions: 423271
Number of successful extensions: 1150
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -