Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0756
(689 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7948 Cluster: PREDICTED: similar to ovo CG6824... 36 0.71
UniRef50_UPI00015B5978 Cluster: PREDICTED: similar to conserved ... 36 1.2
UniRef50_Q6N716 Cluster: Possible biotin synthase; n=3; Bradyrhi... 35 1.6
UniRef50_Q5KVD0 Cluster: Imidazole glycerol phosphate synthase s... 34 3.8
UniRef50_Q07XM1 Cluster: Ribokinase; n=3; Shewanella|Rep: Riboki... 33 6.6
UniRef50_A4CDW7 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_Q9LMK9 Cluster: F10K1.13 protein; n=1; Arabidopsis thal... 33 8.7
UniRef50_A4D2Q4 Cluster: LOC389455; n=1; Homo sapiens|Rep: LOC38... 33 8.7
UniRef50_A3LZU2 Cluster: Dynein heavy chain, cytosolic; n=1; Pic... 33 8.7
UniRef50_A2R8K3 Cluster: Function: N. crassa QDE2 controls trans... 33 8.7
UniRef50_Q02521 Cluster: Pre-mRNA-splicing factor SPP2; n=2; Sac... 33 8.7
>UniRef50_UPI0000DB7948 Cluster: PREDICTED: similar to ovo
CG6824-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to ovo CG6824-PB, isoform B - Apis
mellifera
Length = 890
Score = 36.3 bits (80), Expect = 0.71
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +1
Query: 415 P*SCFGRRAPVGRAEALQL------YRVQSDADYEC*-YSATSWPPHSNPPPQTNSTSAL 573
P C G+ +P+G AE L L YR ++D D S S P S+PPPQ ST+
Sbjct: 28 PPPCSGKESPLGSAEPLSLIVNKHQYREKTDDDRATTPESLRSSSPASSPPPQWQSTNTP 87
Query: 574 XLTGPSSF 597
T P F
Sbjct: 88 SNTPPRRF 95
>UniRef50_UPI00015B5978 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 623
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/34 (64%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +1
Query: 538 NPPPQTNSTSALXLTGP-SSFQLQKPP--GKRGK 630
NPP TN T+ L T P SSFQLQKPP KRGK
Sbjct: 591 NPP--TNLTAPLSTTDPNSSFQLQKPPVGNKRGK 622
>UniRef50_Q6N716 Cluster: Possible biotin synthase; n=3;
Bradyrhizobiaceae|Rep: Possible biotin synthase -
Rhodopseudomonas palustris
Length = 205
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -3
Query: 237 AAPSDLGNFTSLAAXPGPEAYPATRALRRMP*VLILFGSVILVSIASVCLRFPFV 73
+AP +G T+LAA P A RM VLI FGSV+L A V L P V
Sbjct: 6 SAPPRMGGHTALAAALWPRRTDGFSAWLRMA-VLIAFGSVLLALSAKVNLPLPLV 59
>UniRef50_Q5KVD0 Cluster: Imidazole glycerol phosphate synthase
subunit hisF; n=21; cellular organisms|Rep: Imidazole
glycerol phosphate synthase subunit hisF - Geobacillus
kaustophilus
Length = 252
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 323 DQMLQEDVSGKRKFKSTLTGEVNRVSAVLADPRAALGGVHQLAGPKPFSYIGSNLTLITN 502
D+++ D+S + + T+ V RV+A LA P GG+H L K G++ +
Sbjct: 45 DELVFLDISASHEGRKTMVDVVERVAAQLAIPFTVGGGIHSLEDMKRMLRAGADKVSLNT 104
Query: 503 VDTAQP 520
P
Sbjct: 105 AAVLHP 110
>UniRef50_Q07XM1 Cluster: Ribokinase; n=3; Shewanella|Rep:
Ribokinase - Shewanella frigidimarina (strain NCIMB 400)
Length = 424
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = -2
Query: 580 LXSRQTWNSSAAEDSN-GEATRLRCINIRNQRQIGPDIAEGL----RPGQLVHASQSSSR 416
L R N S A DSN G +++ N+ DI L +PG+ +H+S SS
Sbjct: 98 LLDRSILNDSMALDSNQGRLIKMKH-NVFVLGSFNVDIVANLARFPQPGETLHSSSSSIG 156
Query: 415 VGQHGTHSVHFTGQRGLKLSFTANI 341
G G + + + G +SF I
Sbjct: 157 AGGKGANQAYAAAKNGANVSFMTKI 181
>UniRef50_A4CDW7 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Pseudoalteromonas tunicata D2
Length = 840
Score = 33.1 bits (72), Expect = 6.6
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +2
Query: 227 EGAAPSVQELRTYILKEPAATFDLLQNHNTSLDQMLQE-DVSGKRKFKSTLTGEVNRVSA 403
E A + LR +L E T L NHN M E D+ K K + LTG V S
Sbjct: 446 EQKAILAEGLRQLVLHEVGHTLGL--NHNMKASIMWNEKDIHNKTKTQGVLTGSVMDYSP 503
Query: 404 VLADPRAALGGVHQLAGPKPF 466
V PR G P P+
Sbjct: 504 VNVAPRGVKQGDFFQTKPGPY 524
>UniRef50_Q9LMK9 Cluster: F10K1.13 protein; n=1; Arabidopsis
thaliana|Rep: F10K1.13 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 405
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 532 HSNPPPQTNSTSALXLTGPSSFQLQKPPGKRG 627
H NPP + S SA T P +L KPP K G
Sbjct: 40 HLNPPVSSTSPSAASPTSPFCLRLLKPPAKLG 71
>UniRef50_A4D2Q4 Cluster: LOC389455; n=1; Homo sapiens|Rep:
LOC389455 - Homo sapiens (Human)
Length = 118
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 502 C*YSATSWPPHSNPPPQTNSTSALXLTGP 588
C + T+WPPHS+ P +T +TS+ L GP
Sbjct: 43 CVFMTTAWPPHSS-PSRTVTTSSHCLFGP 70
>UniRef50_A3LZU2 Cluster: Dynein heavy chain, cytosolic; n=1; Pichia
stipitis|Rep: Dynein heavy chain, cytosolic - Pichia
stipitis (Yeast)
Length = 4231
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 221 KSEGAAPSVQELRTYILKEPAATFDLLQNHNT-SLDQMLQEDVSG 352
KS +PSV L+T+I K+ F ++++ +T +D+ L+ED G
Sbjct: 965 KSLSISPSVTSLKTFITKKITDIFSIIESQSTVFVDRSLEEDFHG 1009
>UniRef50_A2R8K3 Cluster: Function: N. crassa QDE2 controls
transgene-induced gene silencing; n=8;
Eurotiomycetidae|Rep: Function: N. crassa QDE2 controls
transgene-induced gene silencing - Aspergillus niger
Length = 1068
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 428 LGGVHQLAGPKPFSYIGSNLTLITNVDTAQP 520
LGG +QL PK IG N T++ VD P
Sbjct: 766 LGGNNQLIDPKELGLIGQNKTMLVGVDVTHP 796
>UniRef50_Q02521 Cluster: Pre-mRNA-splicing factor SPP2; n=2;
Saccharomyces cerevisiae|Rep: Pre-mRNA-splicing factor
SPP2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 185
Score = 32.7 bits (71), Expect = 8.7
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = -2
Query: 688 LVQCPELALTKR*SNANIIVFLVCRAASEAGTKM--DPLXSRQTWNSSAAEDSNGEATRL 515
+++ E A TK+ ++A ++ ++ + +E + D L W S + +DS G+ T+
Sbjct: 72 VIKLSENADTKK-NDAPLVEYVTEKEYNEVPVEEFGDALLRGMGWESDSEQDSKGDKTQS 130
Query: 514 RCINIRNQRQIGPD-IAEGLRPGQLVHASQSS 422
R ++ N QI PD + G + + ++ ++S
Sbjct: 131 RNKDVSNVSQIHPDGLGIGAKLNKAINVEEAS 162
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,216,112
Number of Sequences: 1657284
Number of extensions: 14301896
Number of successful extensions: 42142
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42085
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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