Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0756
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    27   0.11 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    27   0.11 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    27   0.11 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   0.11 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    27   0.11 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    27   0.11 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 73  STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 112


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQT----NSTSALXLTGPSSFQLQKPPGK 621
           S    PP S PP  T    N+T +  LT P S     PPGK
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVS-TSPPGK 156


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 197 PGPAQKLTQRLVHYDECPK 141
           PGP    T  L +Y+ CP+
Sbjct: 297 PGPYTNATGFLAYYEICPE 315


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 565 TWNSSAAEDSNGEATRLRCIN 503
           +WNS ++    G+  R +C++
Sbjct: 377 SWNSISSLSHGGQLARFKCLS 397


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = +1

Query: 526 PPHSNPPPQTNSTSALXLTGPSSFQLQKP 612
           PPH  PP Q          G ++  L  P
Sbjct: 203 PPHQQPPIQQQPNQGQQPPGNTAAALPSP 231


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = +1

Query: 526 PPHSNPPPQTNSTSALXLTGPSSFQLQKP 612
           PPH  PP Q          G ++  L  P
Sbjct: 205 PPHQQPPIQQQPNQGQQPPGNTAAALPSP 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,339
Number of Sequences: 336
Number of extensions: 3317
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)